Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7283

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7282: 15650 - HMMPfam-Amidohydrolase family-PF07969,HMMPfam-Amidohydrolase-PF13594,SUPERFAMILY--SSF51338,SUPERFAMILY--SSF51556, at 1290411 to 1292739 15650 mRNA_7283: 15651 - KOG1535 Predicted fumarylacetoacetate hydralase, at 1293181 to 1295231 15651 mRNA_7284: 15652 - KOG0537 Cytochrome b5, at 1295537 to 1296172 15652

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,292,237 - 15650 mRNA_7282 0.78 -0.6
1,292,314 - 15650 mRNA_7282 0.82 -0.8
1,292,319 + 15650 mRNA_7282 0.82 0.0
1,292,331 - 15650 mRNA_7282 0.82 1.0
1,292,371 + 15650 mRNA_7282 0.84 0.8
1,292,423 + 15650 mRNA_7282 0.86 -0.5
1,292,630 + 0.6
1,292,885 - -0.3
1,292,963 + 0.4
1,292,979 + 0.9
1,293,008 + -0.4
1,293,134 + -0.2
1,293,262 - -0.8
1,293,426 + 15651 mRNA_7283 0.12 -2.6
1,293,557 - 15651 mRNA_7283 0.18 -1.8
1,293,593 + 15651 mRNA_7283 0.20 0.4
1,293,663 - 15651 mRNA_7283 0.24 1.8
1,293,725 + 15651 mRNA_7283 0.27 -0.0
1,293,726 - 15651 mRNA_7283 0.27 -0.1
1,293,730 + 15651 mRNA_7283 0.27 2.4
1,293,734 - 15651 mRNA_7283 0.27 1.5
1,294,001 - 15651 mRNA_7283 0.40 0.5
1,294,781 + 15651 mRNA_7283 0.78 -0.4
1,294,875 + 15651 mRNA_7283 0.83 0.3
1,294,890 + 15651 mRNA_7283 0.83 2.3
1,295,271 - -2.6
1,295,330 + 0.7
1,295,429 - 0.8
1,295,648 + 15652 mRNA_7284 0.17 0.6
1,296,067 + 15652 mRNA_7284 0.83 0.2
1,296,068 - 15652 mRNA_7284 0.83 0.8
1,296,082 - 15652 mRNA_7284 0.86 0.5