Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7105

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7104: 15472 - K09448 TEAD transcriptional enhancer factor, at 888433 to 891786 15472 mRNA_7105: 15473 - KOG1890 Phosphoinositide phosphatase SAC1, at 892209 to 895612 15473 mRNA_7106: 15474 - K11313 SUPT3H, SPT3 transcription initiation protein SPT3, at 895700 to 897201 15474

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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891,228 + 15472 mRNA_7104 0.83 0.5
891,249 + 15472 mRNA_7104 0.84 1.6
891,338 - 15472 mRNA_7104 0.87 -0.3
891,358 - 15472 mRNA_7104 0.87 -2.4
891,367 + 15472 mRNA_7104 0.87 0.8
891,384 - 15472 mRNA_7104 0.88 0.3
891,536 - 0.4
891,555 - 0.4
891,615 - -1.0
891,690 - 1.8
891,694 + 2.4
891,699 - 0.3
891,699 - 0.6
891,716 - -0.2
891,726 - -1.5
891,844 - 0.4
891,859 - 0.2
891,873 - 0.9
891,873 - 0.7
891,921 + 0.6
891,924 - 1.2
891,930 - 3.2
892,116 - -0.5
892,122 + 0.7
892,137 + 0.8
892,162 - 0.3
892,170 - 0.2
892,172 - 1.7
892,183 + 0.4
892,192 - -0.2
892,198 - 0.6
892,322 + 0.4
892,345 - 0.1
892,345 + -0.7
892,397 - 2.5
892,475 - -0.0
892,480 - -0.1
892,486 + 0.4
892,650 - 15473 mRNA_7105 0.13 -0.1
892,914 + 15473 mRNA_7105 0.21 0.2
893,214 - 15473 mRNA_7105 0.30 1.0
893,339 + 15473 mRNA_7105 0.33 -0.1
894,201 - 15473 mRNA_7105 0.59 -0.3
894,437 + 15473 mRNA_7105 0.65 0.6
894,489 - 15473 mRNA_7105 0.67 -0.0
894,513 + 15473 mRNA_7105 0.68 0.4
894,977 + 15473 mRNA_7105 0.81 0.4
895,002 - 15473 mRNA_7105 0.82 0.3
895,399 - 0.1
895,417 - -1.2
896,016 + 15474 mRNA_7106 0.21 0.4
896,481 - 15474 mRNA_7106 0.52 1.1