Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7062

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7061: 15429 - K01077 E3.1.3.1, phoA, phoB alkaline phosphatase, at 789472 to 792234 15429 mRNA_7062: 15430 - HMMPfam-N-acetyltransferase-PF00797,SUPERFAMILY--SSF54001, at 792528 to 793710 15430 mRNA_7063: 15431 - Hypothetical Protein, at 793722 to 794198 15431

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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791,699 - 15429 mRNA_7061 0.81 0.4
791,728 - 15429 mRNA_7061 0.82 2.9
791,906 - 15429 mRNA_7061 0.88 0.4
792,025 + 0.4
792,155 - -0.5
792,179 + 0.4
792,331 + 1.3
792,333 - 0.1
792,340 - 0.7
792,344 - -0.4
792,349 + -0.2
792,507 + 0.3
792,630 - 1.1
792,634 + 0.6
792,941 - 15430 mRNA_7062 0.35 -0.1
792,957 + 15430 mRNA_7062 0.36 0.2
793,128 + 15430 mRNA_7062 0.51 -1.3
793,221 - 15430 mRNA_7062 0.59 1.8
793,683 + 0.5
793,693 + 3.2
793,714 - -0.4
793,873 + 15431 mRNA_7063 0.32 -0.6
793,966 + 15431 mRNA_7063 0.51 2.1
794,433 - -0.0
794,435 + 0.9
794,582 + 0.3