Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7055

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7054: 15422 - K14018 PLAA, DOA1, UFD3 phospholipase A-2-activating protein, at 770607 to 773938 15422 mRNA_7055: 15423 - K03841 FBP, fbp fructose-1,6-bisphosphatase I, at 774217 to 775850 15423 mRNA_7056: 15424 - K01557 FAHD1 acylpyruvate hydrolase, at 776372 to 777538 15424

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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773,982 + 0.4
774,003 + 2.0
774,025 + -0.7
774,152 + 1.4
774,467 - 15423 mRNA_7055 0.15 2.1
774,871 - 15423 mRNA_7055 0.40 0.3
774,987 - 15423 mRNA_7055 0.47 -0.3
775,204 + 15423 mRNA_7055 0.60 0.8
775,288 - 15423 mRNA_7055 0.66 0.6
775,416 - 15423 mRNA_7055 0.73 -0.5
775,446 + 15423 mRNA_7055 0.75 0.9
775,575 - 15423 mRNA_7055 0.83 -0.2
775,636 + 15423 mRNA_7055 0.87 -0.4
775,704 + 0.0
775,708 - -0.7
775,726 + 0.2
775,734 - 0.4
775,738 - -1.3
775,739 + 1.0
775,739 - 3.5
775,740 + -1.3
775,746 + 1.0
775,749 + 1.8
775,846 - 2.7
775,861 + -0.1
775,903 - 0.2
776,013 - 1.3
776,026 - -0.2
776,028 - -0.8
776,032 + 0.1
776,034 - 2.4
776,043 - 0.3
776,043 + -0.1
776,047 - -1.1
776,050 - 2.5
776,051 - 1.4
776,053 - 0.3
776,057 + 1.1
776,058 + 2.4
776,062 - 2.0
776,064 - -0.7
776,077 + 0.0
776,124 - -0.6
776,125 - -0.4
776,132 - -1.0
776,132 - 1.3
776,147 + 0.7
776,149 - 1.2
776,168 + 1.2
776,179 - 0.4
776,208 + 0.8
776,298 - 0.3
776,305 + 0.2
776,307 + 0.5
776,324 - -0.9
776,442 + 2.5
776,445 - -1.9
776,763 + 15424 mRNA_7056 0.34 -0.0