Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6845

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6844: 15212 - K12183 TSG101, STP22, VPS23 ESCRT-I complex subunit TSG101, at 253096 to 258115 15212 mRNA_6845: 15213 - Hypothetical Protein, at 258219 to 259363 15213

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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258,228 - 0.0
258,290 + 1.0
258,445 - 15213 mRNA_6845 0.20 1.3
258,447 + 15213 mRNA_6845 0.20 0.3
258,676 - 15213 mRNA_6845 0.40 -1.2
258,798 - 15213 mRNA_6845 0.51 0.5
258,811 + 15213 mRNA_6845 0.52 -1.3
258,812 + 15213 mRNA_6845 0.52 0.6
258,907 + 15213 mRNA_6845 0.60 0.9
258,981 + 15213 mRNA_6845 0.67 1.2
259,055 - 15213 mRNA_6845 0.73 0.0
259,121 - 15213 mRNA_6845 0.79 0.6
259,325 - -0.4
259,907 + 2.1
260,031 + -0.3
260,159 + 0.8
260,283 - 0.6
260,326 + -0.5