Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6697

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6696: 15064 - KOG3519 Invasion-inducing protein TIAM1/CDC24 and related RhoGEF GTPases, at 1467574 to 1471494 15064 mRNA_6697: 15065 - K07188 LIPE, HSL hormone-sensitive lipase, at 1472035 to 1475787 15065 mRNA_6698: 15066 - K00819 rocD, OAT ornithine--oxo-acid transaminase, at 1476138 to 1478780 15066

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,471,106 + 3.0
1,471,122 - 0.4
1,471,233 + 0.4
1,471,282 - 1.1
1,471,296 + -0.2
1,471,426 + 2.4
1,471,435 - 0.8
1,471,563 + -0.9
1,471,565 - -1.4
1,471,624 - 0.4
1,471,713 - 0.4
1,471,722 - -0.0
1,471,727 + -1.0
1,471,727 - 1.4
1,471,728 - 0.7
1,471,739 + 0.2
1,471,742 - 0.0
1,471,744 - 0.0
1,471,752 - -0.0
1,471,892 - 0.4
1,471,911 - 0.9
1,471,920 + 0.6
1,472,499 - 15065 mRNA_6697 0.12 -0.7
1,472,724 - 15065 mRNA_6697 0.18 -0.1
1,472,764 - 15065 mRNA_6697 0.19 1.8
1,472,900 - 15065 mRNA_6697 0.23 0.1
1,472,934 - 15065 mRNA_6697 0.24 0.2
1,473,062 - 15065 mRNA_6697 0.27 0.3
1,473,083 - 15065 mRNA_6697 0.28 0.2
1,473,198 + 15065 mRNA_6697 0.31 -0.3
1,473,383 + 15065 mRNA_6697 0.36 0.2
1,473,559 + 15065 mRNA_6697 0.41 1.0
1,473,685 + 15065 mRNA_6697 0.44 -0.1
1,473,787 - 15065 mRNA_6697 0.47 -0.5
1,474,258 - 15065 mRNA_6697 0.59 1.7
1,474,382 - 15065 mRNA_6697 0.63 0.5
1,474,402 - 15065 mRNA_6697 0.63 0.7
1,474,411 - 15065 mRNA_6697 0.63 0.4
1,474,531 - 15065 mRNA_6697 0.67 0.4
1,474,540 + 15065 mRNA_6697 0.67 0.8
1,474,547 + 15065 mRNA_6697 0.67 0.2
1,474,686 + 15065 mRNA_6697 0.71 0.9
1,474,690 + 15065 mRNA_6697 0.71 0.3
1,474,853 - 15065 mRNA_6697 0.75 0.3
1,475,245 + 15065 mRNA_6697 0.86 1.3
1,475,412 + -0.3
1,475,421 - 0.2
1,475,453 + 1.0
1,475,552 - 1.4
1,475,560 + -0.7
1,475,561 + -1.1
1,475,568 + 0.2
1,475,591 + 0.2
1,475,684 - 0.1
1,475,719 - 1.5
1,475,879 + 0.5
1,475,889 + 0.8
1,475,894 - 1.2
1,475,932 - -0.9
1,475,938 - 0.8
1,475,944 + 1.2
1,476,041 - 0.7
1,476,044 - 0.9
1,476,085 + 1.0
1,476,196 + 0.4
1,476,196 + 0.0
1,476,319 + 1.0
1,476,359 - -0.2
1,476,486 + 15066 mRNA_6698 0.13 -0.3
1,476,490 + 15066 mRNA_6698 0.13 -0.2