Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6638

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6637: 15005 - K15711 SMARCA3, HLTF SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A3, at 1309484 to 1313910 15005 mRNA_6638: 15006 - K02575 NRT, narK, nrtP, nasA MFS transporter, NNP family, nitrate/nitrite transporter, at 1314134 to 1316580 15006

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,313,897 + 1.1
1,314,176 - 1.1
1,314,177 - -0.1
1,314,259 - 1.1
1,314,446 + 15006 mRNA_6638 0.13 0.2
1,314,999 - 15006 mRNA_6638 0.35 -0.4
1,315,481 + 15006 mRNA_6638 0.55 -0.7
1,315,517 + 15006 mRNA_6638 0.57 -0.1
1,315,707 + 15006 mRNA_6638 0.64 0.0
1,316,874 - 1.3
1,316,921 - -0.1
1,317,067 - 0.3
1,317,080 + 0.8
1,317,145 + 0.7
1,317,149 + -0.9
1,317,150 - 0.1
1,317,153 + 0.1
1,317,155 + -2.5
1,317,160 + 1.5
1,317,184 + 0.3
1,317,212 - 0.2
1,317,215 - -0.0
1,317,225 - -0.3
1,317,226 - -1.2
1,317,434 - -0.2
1,317,508 + 0.0
1,317,517 - 0.2
1,317,530 + -0.8
1,317,533 - 0.3
1,317,535 + 0.1
1,317,543 + 0.3