Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6629

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6628: 14996 - KOG0446 Vacuolar sorting protein VPS1, dynamin, and related proteins, at 1284165 to 1286987 14996 mRNA_6629: 14997 - KOG0538 Glycolate oxidase, at 1287348 to 1288864 14997 mRNA_6630: 14998 - KOG0463 GTP-binding protein GP-1, at 1289134 to 1291878 14998

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,286,422 - 14996 mRNA_6628 0.80 0.7
1,286,557 - 14996 mRNA_6628 0.85 -0.4
1,286,564 + 14996 mRNA_6628 0.85 0.1
1,286,746 + 0.0
1,286,749 - 0.8
1,287,173 + 0.3
1,287,436 - -1.1
1,287,496 - -1.1
1,287,521 - 14997 mRNA_6629 0.11 0.1
1,287,646 + 14997 mRNA_6629 0.20 -0.6
1,287,906 + 14997 mRNA_6629 0.37 -0.2
1,288,124 + 14997 mRNA_6629 0.51 0.2
1,288,171 - 14997 mRNA_6629 0.54 0.2
1,288,262 + 14997 mRNA_6629 0.60 0.1
1,288,371 + 14997 mRNA_6629 0.67 1.1
1,288,703 + 14997 mRNA_6629 0.89 1.3
1,288,809 + 1.5
1,288,959 - -0.8
1,289,075 - 3.7
1,289,345 + 0.9
1,289,384 - 2.9
1,289,387 + 0.6
1,289,388 + 0.4
1,289,508 - 14998 mRNA_6630 0.14 -0.5
1,289,677 + 14998 mRNA_6630 0.20 -0.0
1,289,846 + 14998 mRNA_6630 0.26 0.2