Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6570

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6569: 14937 - K02978 RP-S27e, RPS27 small subunit ribosomal protein S27e, at 1122107 to 1122716 14937 mRNA_6570: 14938 - K09184 GATAF GATA-binding protein, other eukaryote, at 1123067 to 1127630 14938 mRNA_6571: 14939 - K11790 DTL, CDT2, DCAF2 denticleless, at 1128601 to 1130974 14939

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,122,893 + 0.2
1,123,072 - 0.0
1,123,324 - -0.9
1,123,348 + -1.0
1,123,804 + 14938 mRNA_6570 0.16 0.4
1,123,939 - 14938 mRNA_6570 0.19 -0.4
1,124,087 - 14938 mRNA_6570 0.22 0.2
1,124,396 + 14938 mRNA_6570 0.29 -0.1
1,124,565 + 14938 mRNA_6570 0.33 -1.0
1,124,712 - 14938 mRNA_6570 0.36 1.7
1,124,854 + 14938 mRNA_6570 0.39 0.9
1,125,196 - 14938 mRNA_6570 0.47 2.0
1,125,343 + 14938 mRNA_6570 0.50 0.9
1,125,768 + 14938 mRNA_6570 0.59 0.7
1,125,815 - 14938 mRNA_6570 0.60 -0.2
1,125,876 - 14938 mRNA_6570 0.62 0.3
1,126,023 + 14938 mRNA_6570 0.65 1.4
1,126,325 - 14938 mRNA_6570 0.71 -0.4
1,126,626 + 14938 mRNA_6570 0.78 0.3
1,126,635 - 14938 mRNA_6570 0.78 0.7
1,126,903 + 14938 mRNA_6570 0.84 -0.9
1,126,920 - 14938 mRNA_6570 0.84 -0.1
1,126,922 + 14938 mRNA_6570 0.84 -1.1
1,127,045 - 14938 mRNA_6570 0.87 1.8
1,127,129 + 14938 mRNA_6570 0.89 -0.8
1,127,241 - 2.0
1,127,358 - -0.3
1,127,363 - 0.3
1,127,367 + -0.2
1,127,368 - 1.7
1,127,370 - -0.6
1,127,391 + -0.6
1,127,394 + 1.3
1,127,399 - 0.6
1,127,416 + 0.4
1,127,524 + -0.2
1,127,531 - 0.1
1,127,649 + 1.4
1,127,677 - -0.5
1,127,835 - -0.4
1,127,838 + -0.2
1,127,845 - 0.7
1,127,849 - -0.5
1,127,850 + 0.2
1,127,867 + 2.5
1,127,867 + 0.6
1,127,868 + 1.5
1,127,868 + 0.9
1,127,868 + 0.2
1,127,970 - 1.1
1,127,975 + 0.6
1,127,985 - 0.6
1,128,002 + 0.3
1,128,050 + 0.3
1,128,099 - -0.7
1,128,103 + 1.2
1,128,116 + -0.8
1,128,149 - 0.3
1,128,150 - -0.0
1,128,150 - 0.6
1,128,152 - -0.5
1,128,153 + -0.2
1,128,161 + 1.6
1,128,161 - -0.4
1,128,167 + 0.6
1,128,167 + -1.2
1,128,173 - -0.2
1,128,175 - -1.0
1,128,178 + 1.7
1,128,183 + 0.1
1,128,185 - 0.5
1,128,192 - 0.1
1,128,193 + 0.7
1,128,195 + -1.2
1,128,240 + -0.4
1,128,249 - 1.9
1,128,254 + -0.2
1,128,255 + -0.0
1,128,257 + 1.2
1,128,278 + -0.3
1,128,280 - -1.0
1,128,289 - -0.8
1,128,297 + -1.3
1,128,307 + 0.7
1,128,310 - 0.1
1,128,326 - 0.6
1,128,330 - 1.5
1,128,334 + -0.1
1,128,345 - 1.0
1,128,352 - 0.9
1,128,353 + 1.6
1,128,353 - 0.2
1,128,360 - -0.2
1,128,360 - -0.1
1,128,362 + 0.5
1,128,364 + -0.7
1,128,377 - -1.3
1,128,402 - -0.2
1,128,406 - 0.2
1,128,407 + -0.8
1,128,417 + -0.1
1,128,419 + -0.8
1,128,494 - -1.2
1,128,530 - 0.6
1,128,540 + 1.5
1,128,541 + 0.3
1,128,542 - 1.2
1,128,559 - -0.0
1,128,564 + 0.3
1,128,577 - 0.3
1,128,587 + -0.2