Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6540

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6539: 14907 - K19800 SCH9 serine/threonine protein kinase SCH9, at 1028539 to 1031379 14907 mRNA_6540: 14908 - K00838 ARO8 aromatic amino acid aminotransferase I, at 1031966 to 1033668 14908 mRNA_6541: 14909 - K14819 DUSP12, YVH1 dual specificity phosphatase 12, at 1034476 to 1036379 14909

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,031,098 + 0.9
1,031,200 + 1.3
1,031,200 - 0.6
1,031,826 + 1.2
1,032,394 - 14908 mRNA_6540 0.25 2.1
1,032,683 + 14908 mRNA_6540 0.42 0.8
1,032,685 + 14908 mRNA_6540 0.42 -0.4
1,032,686 - 14908 mRNA_6540 0.42 0.5
1,032,714 - 14908 mRNA_6540 0.44 1.4
1,032,717 + 14908 mRNA_6540 0.44 0.6
1,032,824 + 14908 mRNA_6540 0.50 0.2
1,032,907 - 14908 mRNA_6540 0.55 1.0
1,033,938 + -1.1
1,033,992 + 1.4
1,034,140 + 0.9
1,034,297 - 1.7
1,034,412 - 1.8
1,034,418 - 0.8
1,034,422 - 0.5