Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6513

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6513: 14881 - HMMPfam-Glycosyl transferase family 90-PF05686,SMART-Putative lipopolysaccharide-modifying enzyme.-SM00672, at 964907 to 967353 14881 mRNA_6514: 14882 - KOG1441 Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter, at 968322 to 969938 14882

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
963,990 + 0.6
964,433 - -2.1
964,512 - -0.9
964,525 - 0.6
964,759 + 1.3
964,898 - 0.7
964,944 + 0.7
965,232 + 14881 mRNA_6513 0.13 -1.6
965,346 + 14881 mRNA_6513 0.18 2.9
965,453 - 14881 mRNA_6513 0.22 1.3
965,495 - 14881 mRNA_6513 0.24 0.8
965,503 - 14881 mRNA_6513 0.24 0.6
965,795 - 14881 mRNA_6513 0.36 1.5
965,796 + 14881 mRNA_6513 0.36 0.4
966,028 + 14881 mRNA_6513 0.46 0.1
966,469 - 14881 mRNA_6513 0.64 0.6
966,511 - 14881 mRNA_6513 0.66 1.1
966,654 - 14881 mRNA_6513 0.71 0.5
966,661 - 14881 mRNA_6513 0.72 1.7
966,801 - 14881 mRNA_6513 0.77 0.2
967,085 + 14881 mRNA_6513 0.89 1.1
967,092 - 14881 mRNA_6513 0.89 0.7
967,220 + 0.5
967,224 - 0.8
967,232 - 0.5
967,252 - 0.7
967,376 - 0.4
967,386 + 0.4
967,391 - 0.4
967,400 - 1.6
967,415 - -0.4
967,534 - 0.8
967,544 - -0.4
967,544 - 0.2
967,546 - 0.1
967,558 - 0.1
967,569 - 0.9
967,602 + 0.3
967,700 + -1.6
967,705 + -0.9
967,712 - 2.1
967,839 + 0.7
967,979 - -0.2
968,019 + -0.2
968,125 + 0.6
968,270 - 2.7
968,278 - 0.3
968,280 + 0.8