Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6411

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6411: 14779 - BLAST proteophosphoglycan ppg4 [Moniliophthora roreri M..., at 746136 to 749829 14779 mRNA_6412: 14780 - HMMPfam-F-box-like-PF12937, at 750026 to 751228 14780

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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745,168 + 0.2
745,204 + -0.1
745,450 - 2.1
745,617 - 1.2
745,888 - 0.5
745,893 - 1.8
745,907 - -0.7
745,908 - 0.2
745,909 + -0.3
745,922 - 0.4
745,922 - 0.4
746,040 + 1.1
746,043 - 0.0
746,051 - -0.1
746,053 + 0.3
746,062 - -0.1
746,085 + 0.1
746,215 - 0.7
746,501 + 0.1
746,510 + 14779 mRNA_6411 0.10 -0.1
746,969 + 14779 mRNA_6411 0.23 1.1
749,780 + 1.7
750,052 + 1.3
750,088 + 1.9
750,471 - 14780 mRNA_6412 0.37 0.3
750,660 + 14780 mRNA_6412 0.53 0.1