Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6346

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6345: 14713 - HMMPfam-START domain-PF01852,ProSiteProfiles-START domain profile.-PS50848,SUPERFAMILY--SSF55961, at 596038 to 599020 14713 mRNA_6346: 14714 - HMMPfam-Protein of unknown function (DUF938)-PF06080,SUPERFAMILY--SSF53335, at 599677 to 600627 14714 mRNA_6347: 14715 - Hypothetical Protein, at 601204 to 601756 14715

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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598,729 - -0.6
599,415 - 2.0
599,418 - 1.3
599,419 + 0.8
599,420 + -0.0
599,432 + -0.6
599,450 + -0.0
599,451 + -0.4
599,468 - -1.6
599,474 - -0.6
599,482 + -0.5
599,482 - -1.2
599,483 - -0.7
599,484 + 1.4
599,487 + 0.6
599,487 - -0.0
599,489 + -1.1
599,588 + 1.1
599,605 + 0.2
599,609 - 2.2
599,609 - 0.7
599,631 - -0.6
599,663 - 0.2
599,679 + -1.4
599,679 + -0.6
599,735 - 1.7
599,748 + 0.8
599,767 - -0.7
599,837 + 14714 mRNA_6346 0.17 2.6
599,854 + 14714 mRNA_6346 0.19 -0.2
599,859 - 14714 mRNA_6346 0.19 1.2
599,876 + 14714 mRNA_6346 0.21 -0.0
599,877 - 14714 mRNA_6346 0.21 1.9
599,898 - 14714 mRNA_6346 0.23 1.2
600,039 - 14714 mRNA_6346 0.38 0.3
600,514 + 14714 mRNA_6346 0.88 0.4
600,514 + 14714 mRNA_6346 0.88 0.1
600,618 - -0.0
601,040 + -1.5
601,193 + 0.9
601,341 + 14715 mRNA_6347 0.25 0.7
601,464 - 14715 mRNA_6347 0.47 0.4
601,481 + 14715 mRNA_6347 0.50 1.8
601,487 - 14715 mRNA_6347 0.51 0.8