Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6293

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6292: 14660 - K15082 RAD7 DNA repair protein RAD7, at 455485 to 457859 14660 mRNA_6293: 14661 - K18467 VPS29 vacuolar protein sorting-associated protein 29, at 458266 to 459644 14661 mRNA_6294: 14662 - K00928 lysC aspartate kinase, at 460272 to 462518 14662

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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457,897 - -0.3
458,072 - 1.5
458,211 + 0.3
458,347 - 0.4
458,762 - 14661 mRNA_6293 0.36 0.3
458,771 - 14661 mRNA_6293 0.37 -0.2
459,371 - 14661 mRNA_6293 0.80 -0.1
459,403 + 14661 mRNA_6293 0.82 2.4
459,520 + 1.2
459,618 - -1.0
459,630 - 0.6
459,631 - 1.2
459,639 + 0.3
459,640 - 0.6
459,671 - 1.7
459,697 + -0.2
459,698 + -0.6
459,789 - -0.2
459,808 - 0.6
459,810 + 0.7
459,828 + 1.6
459,828 - 0.5
459,841 + 1.8
459,949 - 0.0