Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6162

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6160: 14528 - Hypothetical Protein, at 144643 to 145145 14528 mRNA_6161: 14529 - Hypothetical Protein, at 145204 to 145497 14529 mRNA_6162: 14530 - K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific, at 145690 to 148355 14530 mRNA_6163: 14531 - HMMPfam-Autophagy protein 16 (ATG16)-PF08614, at 148660 to 149493 14531

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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145,064 + 14528 mRNA_6160 0.84 0.6
145,095 - 0.4
145,361 + 14529 mRNA_6161 0.53 1.2
145,375 + 14529 mRNA_6161 0.58 -0.7
145,404 + 14529 mRNA_6161 0.68 0.3
145,405 + 14529 mRNA_6161 0.68 1.9
145,409 + 14529 mRNA_6161 0.70 1.0
145,489 - 0.7
145,497 + 1.0
145,524 - -1.3
145,527 + 0.6
145,527 + -0.0
145,527 + -0.3
145,941 + 1.8
145,969 - 14530 mRNA_6162 0.10 1.2
146,390 - 14530 mRNA_6162 0.26 -1.1
146,628 - 14530 mRNA_6162 0.35 -0.6
146,800 - 14530 mRNA_6162 0.42 -1.1
147,154 + 14530 mRNA_6162 0.55 -0.3
147,229 + 14530 mRNA_6162 0.58 0.4
147,633 + 14530 mRNA_6162 0.73 0.0
147,768 - 14530 mRNA_6162 0.78 0.0
148,090 + -0.5
148,392 - -0.0
148,511 - 0.6
148,533 - 0.5
148,729 + 0.4
148,995 + 14531 mRNA_6163 0.40 -0.5
149,271 + 14531 mRNA_6163 0.73 3.2
149,277 - 14531 mRNA_6163 0.74 1.5