Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6154

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6154: 14522 - K16667 PTPRG receptor-type tyrosine-protein phosphatase gamma, at 133895 to 137413 14522 mRNA_6155: 14523 - Hypothetical Protein, at 137746 to 139265 14523

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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132,931 + 0.8
133,134 - 1.4
133,280 - -1.4
133,280 + 0.2
133,297 + 1.6
133,297 + 1.1
133,299 + -1.0
133,347 - 0.3
133,402 - 0.7
133,449 - 0.6
133,449 - 0.9
133,456 + 1.3
133,459 - -0.3
133,459 - 1.2
133,462 + 0.5
133,474 - 0.5
133,474 - 1.0
133,475 + -0.4
133,476 - 1.8
133,498 - 1.3
133,498 + -1.7
133,506 + 0.8
133,509 + 0.9
133,597 + 1.2
133,600 - -0.3
133,618 - 1.7
133,628 + 2.1
133,630 - 0.4
133,632 - 0.5
133,639 + -0.3
133,648 - 0.2
133,663 - 1.1
133,669 + 0.5
133,672 - 1.1
133,677 - 0.2
133,689 - 0.5
133,845 + -0.1
133,961 + 1.1
133,984 + 1.6
134,120 + 1.4
134,121 - 0.9
134,125 + 2.0
134,129 - 1.3
134,262 + 14522 mRNA_6154 0.10 0.8
134,545 - 14522 mRNA_6154 0.18 2.2
134,561 - 14522 mRNA_6154 0.19 1.9
134,574 + 14522 mRNA_6154 0.19 1.6
134,594 + 14522 mRNA_6154 0.20 0.8
134,600 - 14522 mRNA_6154 0.20 1.6
134,832 - 14522 mRNA_6154 0.27 0.9
134,846 - 14522 mRNA_6154 0.27 1.1
134,847 - 14522 mRNA_6154 0.27 1.3
134,865 + 14522 mRNA_6154 0.28 1.3
135,016 + 14522 mRNA_6154 0.32 1.8
135,137 + 14522 mRNA_6154 0.35 1.8
135,219 - 14522 mRNA_6154 0.38 1.6
135,427 + 14522 mRNA_6154 0.44 1.4
135,523 - 14522 mRNA_6154 0.46 1.2
135,543 + 14522 mRNA_6154 0.47 1.1
135,573 - 14522 mRNA_6154 0.48 1.3
135,916 - 14522 mRNA_6154 0.57 1.3
136,134 + 14522 mRNA_6154 0.64 1.6
136,139 + 14522 mRNA_6154 0.64 1.6
136,187 - 14522 mRNA_6154 0.65 0.5
136,260 - 14522 mRNA_6154 0.67 1.9
136,283 - 14522 mRNA_6154 0.68 1.0
136,300 + 14522 mRNA_6154 0.68 1.1
136,334 - 14522 mRNA_6154 0.69 1.0
136,477 + 14522 mRNA_6154 0.73 1.1
136,716 - 14522 mRNA_6154 0.80 1.5
136,943 + 14522 mRNA_6154 0.87 1.4
137,001 - 14522 mRNA_6154 0.88 1.0
137,009 + 14522 mRNA_6154 0.88 1.2
137,129 + 1.3
137,269 - 2.4
137,302 - -0.1
137,364 - 1.0
137,402 + 0.5
137,531 + 1.2
137,654 + 0.3
138,325 - 14523 mRNA_6155 0.38 0.5