Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6093

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6092: 14460 - K06639 CDC14 cell division cycle 14, at 1628198 to 1631375 14460 mRNA_6093: 14461 - HMMPfam-Permease for cytosine/purines, uracil, thiamine, allantoin-PF02133,PIRSF--PIRSF002744, at 1631626 to 1633865 14461 mRNA_6094: 14462 - K16738 NDE1, NUDE nuclear distribution protein NudE, at 1634041 to 1636155 14462

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,630,856 - 14460 mRNA_6092 0.84 1.0
1,630,994 - 14460 mRNA_6092 0.88 1.1
1,631,003 - 14460 mRNA_6092 0.88 0.8
1,631,018 + 14460 mRNA_6092 0.89 -0.2
1,631,473 + 1.1
1,631,889 + 14461 mRNA_6093 0.12 1.3
1,631,903 + 14461 mRNA_6093 0.12 -0.1
1,632,293 + 14461 mRNA_6093 0.30 1.4
1,632,329 - 14461 mRNA_6093 0.31 -0.9
1,632,333 + 14461 mRNA_6093 0.32 -1.0
1,632,433 + 14461 mRNA_6093 0.36 0.9
1,632,498 - 14461 mRNA_6093 0.39 2.8
1,632,762 - 14461 mRNA_6093 0.51 1.5
1,632,924 - 14461 mRNA_6093 0.58 1.8
1,633,078 - 14461 mRNA_6093 0.65 -0.2
1,633,364 + 14461 mRNA_6093 0.78 -0.5
1,633,485 - 14461 mRNA_6093 0.83 2.2
1,633,505 + 14461 mRNA_6093 0.84 0.1
1,633,515 + 14461 mRNA_6093 0.84 -0.3
1,633,628 - 14461 mRNA_6093 0.89 1.3
1,633,767 + 1.0
1,633,807 + -0.2
1,633,814 + -0.5
1,633,816 + -0.4
1,633,918 + 1.2
1,633,946 - -0.3
1,633,947 + 0.9
1,633,948 - 0.5
1,633,956 + -0.4
1,633,958 + -1.2
1,633,967 + 0.2
1,633,969 - -2.0
1,633,975 - 0.5
1,633,976 - -1.1
1,633,978 + 2.0
1,633,981 - 0.4
1,633,984 + -0.7
1,633,989 + 1.3
1,633,989 - -1.5
1,633,991 + 0.2
1,633,992 - 2.4
1,633,992 - -1.0
1,633,993 + -0.1
1,633,994 - -0.6
1,633,995 + -0.4
1,634,011 - 0.4
1,634,015 + 0.3
1,634,053 + 0.5
1,634,061 - -0.3
1,634,078 - -0.0
1,634,078 - -0.2
1,634,085 - 0.6
1,634,094 + 1.7
1,634,099 - -2.2
1,634,111 + 0.2
1,634,115 - -0.9
1,634,116 - 1.2
1,634,121 + 0.3
1,634,121 + 2.3
1,634,122 + -0.8
1,634,127 + -0.6
1,634,127 - 1.6
1,634,130 + -0.5
1,634,132 + -0.5
1,634,133 + -0.0
1,634,134 - 0.1
1,634,146 + 2.0
1,634,154 - 1.5
1,634,155 + -0.7
1,634,157 - -1.2
1,634,162 + 0.5
1,634,164 + 0.4
1,634,168 - -0.6
1,634,206 + 0.5
1,634,211 + 1.2
1,634,212 - -0.3
1,634,212 - -0.5
1,634,213 + 0.2
1,634,215 + 0.8
1,634,215 + -0.8
1,634,229 + -1.3
1,634,229 + -0.8
1,634,233 + 0.2
1,634,268 + 14462 mRNA_6094 0.11 0.7
1,634,291 + 14462 mRNA_6094 0.12 0.1
1,634,345 - 14462 mRNA_6094 0.14 0.0
1,634,373 - 14462 mRNA_6094 0.16 -1.7
1,634,397 + 14462 mRNA_6094 0.17 0.9
1,634,426 - 14462 mRNA_6094 0.18 0.5
1,634,535 - 14462 mRNA_6094 0.23 0.2
1,634,567 + 14462 mRNA_6094 0.25 0.0
1,634,695 + 14462 mRNA_6094 0.31 -0.6