Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5683

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5683: 14051 - K15505 RAD5 DNA repair protein RAD5, at 683055 to 687923 14051 mRNA_5684: 14052 - K07404 pgl 6-phosphogluconolactonase, at 687998 to 689292 14052

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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682,983 + 0.9
682,987 + 0.3
682,987 - 0.1
683,043 - 0.4
683,154 - -2.1
683,159 + -0.4
683,161 - 0.4
683,168 - -0.2
683,321 + 2.8
683,442 - -1.4
683,446 - 1.0
683,451 + -0.5
683,740 + 14051 mRNA_5683 0.14 -0.1
683,766 - 14051 mRNA_5683 0.15 -0.0
683,861 + 14051 mRNA_5683 0.17 0.2
684,026 - 14051 mRNA_5683 0.20 2.4
684,262 - 14051 mRNA_5683 0.25 -0.2
684,745 - 14051 mRNA_5683 0.35 -1.5
684,745 - 14051 mRNA_5683 0.35 1.6
684,872 + 14051 mRNA_5683 0.37 0.4
684,878 - 14051 mRNA_5683 0.37 0.2
684,886 + 14051 mRNA_5683 0.38 0.3
684,910 - 14051 mRNA_5683 0.38 1.0
684,916 - 14051 mRNA_5683 0.38 -0.1
684,947 - 14051 mRNA_5683 0.39 0.5
685,102 - 14051 mRNA_5683 0.42 0.3
685,400 - 14051 mRNA_5683 0.48 -2.1
685,455 - 14051 mRNA_5683 0.49 -0.1
685,673 - 14051 mRNA_5683 0.54 2.1
685,772 + 14051 mRNA_5683 0.56 0.2
686,055 + 14051 mRNA_5683 0.62 1.7
686,206 + 14051 mRNA_5683 0.65 -0.4
686,230 - 14051 mRNA_5683 0.65 1.3
686,468 + 14051 mRNA_5683 0.70 0.0
686,992 - 14051 mRNA_5683 0.81 0.0
687,000 + 14051 mRNA_5683 0.81 0.0
687,144 + 14051 mRNA_5683 0.84 0.2
687,294 + 14051 mRNA_5683 0.87 0.4
687,367 + 14051 mRNA_5683 0.89 0.6
687,490 + -1.0
687,504 + 1.1
687,609 - -1.1
688,016 + 0.8
688,169 - 14052 mRNA_5684 0.13 -0.5
688,197 + 14052 mRNA_5684 0.15 0.1
688,416 - 14052 mRNA_5684 0.32 0.5
688,488 - 14052 mRNA_5684 0.38 0.6
688,494 - 14052 mRNA_5684 0.38 1.7
688,756 + 14052 mRNA_5684 0.59 0.3
688,764 - 14052 mRNA_5684 0.59 0.0
688,776 - 14052 mRNA_5684 0.60 0.9
688,778 - 14052 mRNA_5684 0.60 0.5
688,782 - 14052 mRNA_5684 0.61 0.6
688,784 + 14052 mRNA_5684 0.61 0.6
688,795 + 14052 mRNA_5684 0.62 0.8