Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5534

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315936 to 317983 13902 mRNA_5535: 13903 - K15305 VAC14, TAX1BP2 vacuole morphology and inheritance protein 14, at 318348 to 322384 13903

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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315,832 + -0.0
315,836 + 0.0
315,843 + 2.1
315,973 - -0.9
316,083 - -0.1
316,107 + -0.3
316,119 - 0.1
316,121 + 0.8
316,550 + 13902 mRNA_5534 0.30 -0.3
316,830 + 13902 mRNA_5534 0.44 1.5
317,116 - 13902 mRNA_5534 0.58 0.7
317,237 - 13902 mRNA_5534 0.64 -0.8
317,258 + 13902 mRNA_5534 0.65 1.6
317,302 + 13902 mRNA_5534 0.67 1.2
317,541 + 13902 mRNA_5534 0.78 -0.5
317,550 - 13902 mRNA_5534 0.79 -0.2
317,558 + 13902 mRNA_5534 0.79 0.2
317,562 + 13902 mRNA_5534 0.79 0.9
317,699 + 13902 mRNA_5534 0.86 0.6
317,722 - 13902 mRNA_5534 0.87 1.1
317,741 - 13902 mRNA_5534 0.88 2.2
317,855 + -1.6
318,012 + -0.4
318,028 - 0.3
318,029 + 0.1
318,033 + 0.8
318,042 + 1.8
318,046 + -0.1
318,173 - 1.4
318,304 - 2.1
318,310 + 1.3
318,313 + 0.2
318,313 + 1.8
318,562 + -0.1