Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5518

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832 13887

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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286,709 - 2.1
287,231 - 1.7
287,268 - -1.0
287,510 + -0.1
287,513 - 0.2
287,595 + 13886 mRNA_5518 0.20 0.7
287,639 + 13886 mRNA_5518 0.29 1.2
287,653 + 13886 mRNA_5518 0.32 2.6
288,039 + -0.3
288,175 - 0.3
288,198 - -0.0
288,211 + 0.5
288,263 + 1.3
288,402 - -0.5
288,497 + 0.4
288,636 - -0.6
288,900 - 13887 mRNA_5519 0.20 0.1
288,902 - 13887 mRNA_5519 0.20 -0.2
288,936 - 13887 mRNA_5519 0.23 0.5