Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5501

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245382 to 247759 13869 mRNA_5502: 13870 - Hypothetical Protein, at 247912 to 250557 13870

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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245,091 + -2.4
245,115 + 0.0
245,379 - -0.4
245,406 - 1.0
245,720 + 13869 mRNA_5501 0.14 -0.5
246,392 + 13869 mRNA_5501 0.42 -0.6
246,956 - 13869 mRNA_5501 0.66 1.2
246,981 - 13869 mRNA_5501 0.67 1.1
247,272 - 13869 mRNA_5501 0.79 -0.8
247,418 - 13869 mRNA_5501 0.86 0.7
247,544 - 0.9
247,715 + 0.8
248,332 - 13870 mRNA_5502 0.16 0.1
248,456 - 13870 mRNA_5502 0.21 1.4
248,508 + 13870 mRNA_5502 0.23 0.4