Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5500

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5499: 13867 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 240567 to 242106 13867 mRNA_5500: 13868 - HMMPfam-BTB/POZ domain-PF00651,ProSiteProfiles-BTB domain profile.-PS50097,ProSiteProfiles-MATH/TRAF domain profile.-PS50144,SUPERFAMILY--SSF49599,SUPERFAMILY--SSF54695, at 242489 to 245110 13868 mRNA_5501: 13869 - Hypothetical Protein, at 245382 to 247759 13869

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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242,007 + 0.5
242,009 + 0.7
242,120 + 0.8
242,144 - 0.2
242,160 + 0.1
242,181 - -0.0
242,193 + 0.8
242,467 - 0.1
242,470 + 0.9
242,483 - 0.4
242,719 + -0.2
242,736 + 2.3
242,760 - 13868 mRNA_5500 0.10 1.0
242,800 - 13868 mRNA_5500 0.12 0.5
242,899 - 13868 mRNA_5500 0.16 1.6
243,050 + 13868 mRNA_5500 0.21 0.5
243,117 + 13868 mRNA_5500 0.24 -0.7
243,217 - 13868 mRNA_5500 0.28 0.0
243,477 + 13868 mRNA_5500 0.38 0.9
243,709 - 13868 mRNA_5500 0.47 -1.4
243,837 + 13868 mRNA_5500 0.51 1.1
243,841 - 13868 mRNA_5500 0.52 0.2
243,857 - 13868 mRNA_5500 0.52 1.5
243,993 - 13868 mRNA_5500 0.57 0.7
244,300 + 13868 mRNA_5500 0.69 1.7
245,091 + -2.4
245,115 + 0.0
245,379 - -0.4
245,406 - 1.0
245,720 + 13869 mRNA_5501 0.14 -0.5