Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5458

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5457: 13825 - KOG2533 Permease of the major facilitator superfamily, at 132935 to 135021 13825 mRNA_5458: 13826 - BLAST expressed protein [Cryptococcus neoformans var. neofo..., at 135775 to 137466 13826 mRNA_5459: 13827 - K11274 WDHD1, CTF4 chromosome transmission fidelity protein 4, at 137712 to 142307 13827

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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134,846 + 0.6
134,958 - 0.7
134,994 - -0.2
134,994 + 0.8
135,005 - 0.2
135,112 - 1.1
135,133 - 1.3
135,133 - 0.5
135,142 + 0.2
135,152 - -1.0
135,155 + -2.1
135,160 + 1.1
135,165 + 0.4
135,192 - -0.1
135,210 + -0.6
135,228 - 0.7
135,238 - -0.2
135,271 - 0.2
135,284 + 1.4
135,285 - 0.9
135,287 + -0.2
135,290 - 0.2
135,299 - 0.7
135,310 - 1.8
135,319 + -0.3
135,319 + 1.1
135,327 - 0.3
135,354 - 1.1
135,446 - -0.7
135,446 - -1.6
135,464 + 1.0
135,464 + 0.9
135,485 - -1.6
135,486 - 1.0
135,486 - 0.2
135,489 + 1.4
135,493 + 0.8
135,506 + 0.1
135,510 + -0.3
135,511 + 1.3
135,560 - 1.6
135,560 - 0.4
135,570 + 0.9
135,571 - -1.8
135,577 - 0.1
135,580 + -2.3
135,581 + 1.7
135,586 + 0.1
135,586 - 0.3
135,607 - -0.5
135,616 + 0.1
135,627 + -0.3
135,632 - -2.4
135,647 - -0.0
135,654 + 0.1
135,656 + -0.8
135,682 - 0.1
135,688 + 2.8
135,724 + 1.1
135,728 + -0.4
135,818 - 0.6
135,825 - 0.5
135,864 - -0.1
135,929 - -1.1
135,944 - -0.5
135,985 + 13826 mRNA_5458 0.12 2.4
135,990 - 13826 mRNA_5458 0.13 0.1
136,025 - 13826 mRNA_5458 0.15 0.9
136,138 + 13826 mRNA_5458 0.21 -0.9
136,173 - 13826 mRNA_5458 0.24 1.2
136,190 + 13826 mRNA_5458 0.25 0.5
137,584 + 0.1
137,642 - 0.5
137,645 + -0.1
137,694 + 0.2
137,719 + 0.8
138,231 + 13827 mRNA_5459 0.11 1.2
138,381 + 13827 mRNA_5459 0.15 0.2