Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5412

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5411: 13779 - K03251 EIF3D translation initiation factor 3 subunit D, at 39180 to 41133 13779 mRNA_5412: 13780 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 41309 to 43272 13780 mRNA_5413: 13781 - ProSitePatterns-Protein kinases ATP-binding region signature.-PS00107,ProSiteProfiles-Protein kinase domain profile.-PS50011,SUPERFAMILY--SSF56112, at 43823 to 46039 13781

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
41,201 + 1.4
41,277 - 0.9
41,284 - 0.4
41,356 - 0.6
41,364 - -0.3
41,421 + 0.7
41,483 + 1.0
41,652 - 13780 mRNA_5412 0.17 1.8
41,753 - 13780 mRNA_5412 0.23 0.6
41,754 - 13780 mRNA_5412 0.23 0.9
41,935 - 13780 mRNA_5412 0.32 0.2
42,298 - 13780 mRNA_5412 0.50 -0.1
42,354 - 13780 mRNA_5412 0.53 0.9
42,487 + 13780 mRNA_5412 0.60 -0.3
42,493 + 13780 mRNA_5412 0.60 0.0
42,683 - 13780 mRNA_5412 0.70 1.5
42,686 - 13780 mRNA_5412 0.70 -0.3
42,743 + 13780 mRNA_5412 0.73 -0.1
42,797 - 13780 mRNA_5412 0.76 0.1
42,812 + 13780 mRNA_5412 0.77 1.7
42,821 - 13780 mRNA_5412 0.77 1.2
42,928 - 13780 mRNA_5412 0.82 -0.9
42,929 + 13780 mRNA_5412 0.82 -1.4
43,188 + 1.5
43,313 + 0.4
43,336 + 0.1
43,344 - -0.1
43,544 - 0.2
43,555 + 1.7
43,639 - -0.4
43,669 + 1.1
43,857 - -1.4
43,980 - -0.3
43,985 + -0.2
43,997 + 2.2
44,156 + 13781 mRNA_5413 0.15 -0.4
44,206 + 13781 mRNA_5413 0.17 1.0
44,235 - 13781 mRNA_5413 0.19 -0.4
44,237 + 13781 mRNA_5413 0.19 1.7