Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5395

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5394: 13762 - SUPERFAMILY--SSF54897, at 121 to 1074 13762 mRNA_5395: 13763 - KOG4551 GPI-GlcNAc transferase complex, PIG-H component, involved in glycosylphosphatidylinositol anchor biosynthesis, at 1148 to 1997 13763 mRNA_5396: 13764 - KOG4567 GTPase-activating protein, at 2092 to 5786 13764

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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158 - 0.8
159 - -0.2
160 - 1.6
169 - 0.5
180 - 1.1
189 + -2.9
198 + 0.8
201 - 2.4
208 - 0.3
210 + 1.4
225 + 13762 mRNA_5394 0.11 -0.5
225 + 13762 mRNA_5394 0.11 0.1
244 + 13762 mRNA_5394 0.13 -2.6
245 - 13762 mRNA_5394 0.13 0.8
271 - 13762 mRNA_5394 0.16 -0.1
276 - 13762 mRNA_5394 0.16 -1.6
277 + 13762 mRNA_5394 0.16 -0.7
280 - 13762 mRNA_5394 0.17 0.4
306 + 13762 mRNA_5394 0.19 0.2
317 - 13762 mRNA_5394 0.21 0.6
345 + 13762 mRNA_5394 0.23 0.1
345 - 13762 mRNA_5394 0.23 -2.3
347 + 13762 mRNA_5394 0.24 0.3
359 - 13762 mRNA_5394 0.25 -1.3
387 - 13762 mRNA_5394 0.28 0.3
399 + 13762 mRNA_5394 0.29 1.2
434 + 13762 mRNA_5394 0.33 2.9
447 - 13762 mRNA_5394 0.34 0.7
485 - 13762 mRNA_5394 0.38 0.3
543 + 13762 mRNA_5394 0.44 0.2
649 + 13762 mRNA_5394 0.55 1.3
667 + 13762 mRNA_5394 0.57 -0.0
667 - 13762 mRNA_5394 0.57 1.8
678 - 13762 mRNA_5394 0.58 0.0
718 + 13762 mRNA_5394 0.63 1.1
723 + 13762 mRNA_5394 0.63 2.3
802 + 13762 mRNA_5394 0.71 0.9
806 + 13762 mRNA_5394 0.72 0.7
905 - 13762 mRNA_5394 0.82 0.2
911 + 13762 mRNA_5394 0.83 2.2
965 + 13762 mRNA_5394 0.88 0.0
966 + 13762 mRNA_5394 0.89 0.6
968 + 13762 mRNA_5394 0.89 0.6
1,014 - 0.9
1,084 - -1.5
1,103 - -0.0
1,110 + 0.5
1,245 - 13763 mRNA_5395 0.11 -0.6
1,260 - 13763 mRNA_5395 0.13 0.3
1,376 - 13763 mRNA_5395 0.27 0.1
1,438 + 13763 mRNA_5395 0.34 -0.2
1,438 + 13763 mRNA_5395 0.34 -0.2
1,438 + 13763 mRNA_5395 0.34 -0.7
1,523 + 13763 mRNA_5395 0.44 -0.6
1,528 - 13763 mRNA_5395 0.45 0.7
1,533 + 13763 mRNA_5395 0.45 0.3
1,538 + 13763 mRNA_5395 0.46 -1.4
1,538 - 13763 mRNA_5395 0.46 1.1
1,556 + 13763 mRNA_5395 0.48 0.0
1,639 + 13763 mRNA_5395 0.58 0.8
1,854 - 13763 mRNA_5395 0.83 1.4
1,855 - 13763 mRNA_5395 0.83 0.3
1,887 - 13763 mRNA_5395 0.87 0.4
1,908 - 13763 mRNA_5395 0.89 -0.3
2,000 - -1.4
2,009 + -0.0
2,093 + -0.1
2,125 - -0.1
2,156 - -0.1
2,162 + -0.8
2,397 + -1.5
2,412 + -0.2
2,570 + 13764 mRNA_5396 0.13 0.9
2,586 + 13764 mRNA_5396 0.13 1.5
2,594 - 13764 mRNA_5396 0.14 1.3
2,597 + 13764 mRNA_5396 0.14 0.6
2,661 + 13764 mRNA_5396 0.15 -0.5
2,773 + 13764 mRNA_5396 0.18 0.3
2,847 - 13764 mRNA_5396 0.20 0.1
2,895 - 13764 mRNA_5396 0.22 0.9
2,923 + 13764 mRNA_5396 0.22 0.2