Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5330

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5330: 13698 - BLAST ZYRO0C04598p [Zygosaccharomyces rouxii], at 471272 to 473464 13698 mRNA_5331: 13699 - SUPERFAMILY--SSF52047, at 473951 to 475290 13699

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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470,875 + 0.7
470,877 - 1.2
470,879 + 0.8
471,012 - 0.4
471,040 + 1.0
471,054 - 0.4
471,057 + 0.4
471,060 - -0.0
471,060 - 0.5
471,062 - 1.0
471,202 - -0.7
471,224 - -0.9
471,608 + 13698 mRNA_5330 0.15 -0.2
471,664 + 13698 mRNA_5330 0.18 0.1
471,793 + 13698 mRNA_5330 0.24 0.9
472,047 + 13698 mRNA_5330 0.35 2.4
472,234 - 13698 mRNA_5330 0.44 -0.1
472,823 + 13698 mRNA_5330 0.71 -0.2
472,838 + 13698 mRNA_5330 0.71 0.1
473,156 - 13698 mRNA_5330 0.86 0.4
473,251 - -1.3
473,302 + 2.2
473,303 - 3.1
473,576 - 0.2
473,576 - 0.5
473,576 + 0.6
473,578 - -1.4
473,580 - 0.6
473,582 - -1.0
473,585 + 1.0
473,589 - -0.1
473,601 - 0.3
473,729 + -0.2
473,859 + 1.4
473,873 + 0.1
473,887 - 0.1
474,023 - -0.6
474,303 - 13699 mRNA_5331 0.26 2.7
474,313 + 13699 mRNA_5331 0.27 0.4
474,316 + 13699 mRNA_5331 0.27 0.8
474,319 + 13699 mRNA_5331 0.27 2.5
474,407 - 13699 mRNA_5331 0.34 -0.0
474,460 + 13699 mRNA_5331 0.38 -1.5