Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5231

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5230: 13598 - K17906 ATG2 autophagy-related protein 2, at 209416 to 215994 13598 mRNA_5231: 13599 - Hypothetical Protein, at 216501 to 218178 13599 mRNA_5232: 13600 - SUPERFAMILY--SSF52047, at 218691 to 220745 13600

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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215,573 + 0.8
215,649 + 0.5
215,652 - 0.1
215,807 + 2.5
215,920 + 1.2
215,947 + 1.8
215,952 - -0.5
215,976 + 0.9
216,104 - 0.9
216,216 - 1.3
216,296 + -0.1
216,375 - 1.3
216,378 + -1.4
216,423 + 0.2
216,429 - 0.0
216,579 + 0.7
216,673 + 13599 mRNA_5231 0.10 0.2
216,705 - 13599 mRNA_5231 0.12 3.0
216,812 + 13599 mRNA_5231 0.19 0.5
217,099 - 13599 mRNA_5231 0.36 0.7
217,264 - 13599 mRNA_5231 0.45 2.6
217,278 - 13599 mRNA_5231 0.46 0.0
217,425 - 13599 mRNA_5231 0.55 0.9
217,716 - 13599 mRNA_5231 0.72 -0.0
217,723 - 13599 mRNA_5231 0.73 0.7
217,739 + 13599 mRNA_5231 0.74 2.0
217,845 - 13599 mRNA_5231 0.80 0.8
217,861 - 13599 mRNA_5231 0.81 0.7
217,877 + 13599 mRNA_5231 0.82 0.9
217,896 - 13599 mRNA_5231 0.83 0.6
218,022 - 0.3
218,024 + 0.8
218,030 - 0.8
218,030 - -0.7
218,031 - 0.3
218,045 - 1.1
218,046 + 0.5
218,054 - -0.1
218,054 - 0.4
218,055 + -0.1
218,055 + -0.1
218,059 + 1.1
218,062 - 0.9
218,063 - 1.6
218,064 + 0.5
218,066 - -1.3
218,068 + 2.0
218,072 - 0.1
218,074 + -0.6
218,074 - 1.5
218,080 + 0.8
218,093 + 0.5
218,096 + 0.6
218,099 - -1.1
218,105 - -0.2
218,120 + -0.6
218,128 - 0.5
218,133 - 0.1
218,142 - -0.3
218,147 + -0.2
218,158 - 0.9
218,160 + 0.1
218,160 + -1.8
218,162 + -0.8
218,164 + -0.9
218,165 + 2.5
218,165 - 0.2
218,166 + 0.7
218,218 - 0.5
218,220 - 0.6
218,245 + 0.7
218,247 + 1.1
218,263 + 0.3
218,294 + 0.6
218,295 - 1.2
218,324 - -0.0
218,328 - 0.0
218,334 - -0.6
218,334 + 0.1
218,337 - 1.2
218,338 - 1.4
218,339 + -0.9
218,341 + -0.1
218,411 + -0.9
218,411 + 2.3
218,505 - 1.2
218,510 - -0.1
218,641 + 0.4
218,658 - 0.9
218,659 - 1.3
218,659 + 2.2
218,933 + 13600 mRNA_5232 0.12 -0.4
218,936 + 13600 mRNA_5232 0.12 0.3
218,937 - 13600 mRNA_5232 0.12 1.5
219,076 + 13600 mRNA_5232 0.19 -0.4
219,080 - 13600 mRNA_5232 0.19 1.1