Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5221

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5221: 13589 - HMMPfam-Cellulase (glycosyl hydrolase family 5)-PF00150,SUPERFAMILY--SSF51445, at 184059 to 187472 13589 mRNA_5222: 13590 - Hypothetical Protein, at 187738 to 188641 13590

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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183,061 + -0.2
183,064 - 0.1
183,069 + 0.7
183,070 + 0.1
183,080 + 0.1
183,093 + 1.1
183,142 + 0.4
183,163 + -0.1
183,198 - -0.3
183,218 + 0.4
183,280 - -2.2
183,316 + 0.4
183,336 - -0.6
183,345 - -2.1
183,454 - -0.1
183,477 - 0.2
183,543 + -0.1
183,786 + 1.6
183,909 + -1.3
183,914 - 0.9
183,916 - 1.0
183,924 - 0.0
183,925 + -0.6
183,939 + 2.4
183,943 + -2.2
184,069 - 2.5
184,086 + -1.3
184,313 + -0.0
184,473 - 13589 mRNA_5221 0.12 0.7
184,482 + 13589 mRNA_5221 0.12 -1.8
184,519 - 13589 mRNA_5221 0.13 0.9
184,522 - 13589 mRNA_5221 0.14 1.0
184,524 - 13589 mRNA_5221 0.14 0.2
184,528 + 13589 mRNA_5221 0.14 -0.0
184,933 + 13589 mRNA_5221 0.26 0.3
185,082 + 13589 mRNA_5221 0.30 -4.3
185,362 + 13589 mRNA_5221 0.38 1.1
185,385 - 13589 mRNA_5221 0.39 0.4
185,656 + 13589 mRNA_5221 0.47 0.1
185,688 - 13589 mRNA_5221 0.48 -0.2
185,692 + 13589 mRNA_5221 0.48 2.4
185,716 + 13589 mRNA_5221 0.49 1.7
185,807 + 13589 mRNA_5221 0.51 0.3
185,832 - 13589 mRNA_5221 0.52 -0.4
185,853 - 13589 mRNA_5221 0.53 0.6
185,934 + 13589 mRNA_5221 0.55 1.2
186,000 - 13589 mRNA_5221 0.57 -0.2
186,102 - 13589 mRNA_5221 0.60 0.2
186,270 - 13589 mRNA_5221 0.65 0.0
186,400 + 13589 mRNA_5221 0.69 0.5
186,403 - 13589 mRNA_5221 0.69 -1.1
186,523 + 13589 mRNA_5221 0.72 0.4
186,525 - 13589 mRNA_5221 0.72 0.3
186,586 - 13589 mRNA_5221 0.74 0.6
186,717 - 13589 mRNA_5221 0.78 0.8
187,013 + 13589 mRNA_5221 0.87 0.0
187,395 - -0.1
187,538 + -3.6
187,561 + 1.7
187,569 + 0.7
187,712 + 1.8
187,739 + 1.5
187,822 + -0.7
188,021 - 13590 mRNA_5222 0.31 1.4
188,189 + 13590 mRNA_5222 0.50 0.3
188,435 + 13590 mRNA_5222 0.77 1.4