Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5166

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5165: 13533 - Hypothetical Protein, at 52326 to 52658 13533 mRNA_5166: 13534 - KOG0590 Checkpoint kinase and related serine/threonine protein kinases, at 53307 to 58220 13534 mRNA_5167: 13535 - Hypothetical Protein, at 58782 to 59470 13535

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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52,359 + 0.3
52,371 - 13533 mRNA_5165 0.14 0.2
52,372 + 13533 mRNA_5165 0.14 -0.3
52,438 + 13533 mRNA_5165 0.34 0.7
52,453 + 13533 mRNA_5165 0.38 0.7
52,460 - 13533 mRNA_5165 0.40 0.6
52,486 - 13533 mRNA_5165 0.48 0.8
52,507 - 13533 mRNA_5165 0.54 0.4
52,510 - 13533 mRNA_5165 0.55 0.5
52,510 - 13533 mRNA_5165 0.55 0.0
52,517 + 13533 mRNA_5165 0.57 1.2
52,520 + 13533 mRNA_5165 0.58 0.4
52,522 + 13533 mRNA_5165 0.59 0.2
52,523 + 13533 mRNA_5165 0.59 -2.1
52,524 - 13533 mRNA_5165 0.59 0.2
52,528 + 13533 mRNA_5165 0.61 0.2
52,530 - 13533 mRNA_5165 0.61 0.5
52,536 + 13533 mRNA_5165 0.63 0.7
52,536 - 13533 mRNA_5165 0.63 0.5
52,538 - 13533 mRNA_5165 0.64 -0.1
52,542 + 13533 mRNA_5165 0.65 -1.3
52,543 + 13533 mRNA_5165 0.65 -0.4
52,560 + 13533 mRNA_5165 0.70 2.3
52,560 + 13533 mRNA_5165 0.70 0.6
52,561 + 13533 mRNA_5165 0.71 1.1
52,567 - 13533 mRNA_5165 0.72 0.8
52,574 - 13533 mRNA_5165 0.74 -0.0
52,577 + 13533 mRNA_5165 0.75 0.2
52,581 - 13533 mRNA_5165 0.77 0.8
52,582 + 13533 mRNA_5165 0.77 -0.1
52,583 - 13533 mRNA_5165 0.77 -1.2
52,584 + 13533 mRNA_5165 0.77 -0.0
52,586 + 13533 mRNA_5165 0.78 0.7
52,596 - 13533 mRNA_5165 0.81 0.5
52,603 - 13533 mRNA_5165 0.83 -1.1
52,648 - 0.1
52,814 + 0.4
52,957 - 0.5
53,154 + -0.6
53,936 + 13534 mRNA_5166 0.13 1.1
54,087 + 13534 mRNA_5166 0.16 3.0
54,171 + 13534 mRNA_5166 0.18 0.7
54,289 - 13534 mRNA_5166 0.20 0.1
54,615 - 13534 mRNA_5166 0.27 -0.7
54,694 - 13534 mRNA_5166 0.28 0.2
54,703 + 13534 mRNA_5166 0.28 0.8
55,015 + 13534 mRNA_5166 0.35 0.4
55,358 - 13534 mRNA_5166 0.42 -1.8
55,381 + 13534 mRNA_5166 0.42 0.5
55,454 - 13534 mRNA_5166 0.44 0.5
55,488 - 13534 mRNA_5166 0.44 1.4
55,551 - 13534 mRNA_5166 0.46 1.1
55,610 - 13534 mRNA_5166 0.47 1.5
55,699 + 13534 mRNA_5166 0.49 0.7
55,755 - 13534 mRNA_5166 0.50 1.2
55,818 - 13534 mRNA_5166 0.51 0.7
56,002 - 13534 mRNA_5166 0.55 1.6
56,206 + 13534 mRNA_5166 0.59 2.7
56,276 + 13534 mRNA_5166 0.60 1.4
56,329 + 13534 mRNA_5166 0.61 0.8
56,522 + 13534 mRNA_5166 0.65 2.0
56,566 - 13534 mRNA_5166 0.66 2.2
57,009 + 13534 mRNA_5166 0.75 2.4
57,441 - 13534 mRNA_5166 0.84 2.0
57,607 + 13534 mRNA_5166 0.88 0.2
57,706 + 13534 mRNA_5166 0.90 0.4
57,707 - 13534 mRNA_5166 0.90 2.0
57,858 - 0.1
57,867 + 0.0
57,896 + -0.0
58,295 - 0.7
58,464 + 1.0
58,586 - -0.2
58,589 - 1.4
58,613 - -0.5
58,633 - -0.5
58,734 + -0.4
59,032 - 13535 mRNA_5167 0.36 2.0
59,174 + 13535 mRNA_5167 0.57 2.1
59,187 + 13535 mRNA_5167 0.59 2.1
59,189 + 13535 mRNA_5167 0.59 1.0