Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5092

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5091: 13459 - Hypothetical Protein, at 1728374 to 1730110 13459 mRNA_5092: 13460 - HMMPfam-RTA1 like protein-PF04479, at 1730393 to 1731831 13460 mRNA_5093: 13461 - Hypothetical Protein, at 1732300 to 1732990 13461

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,730,101 + 0.4
1,730,215 - 0.3
1,730,385 - 0.9
1,730,551 + 13460 mRNA_5092 0.11 1.1
1,730,950 - 13460 mRNA_5092 0.39 0.3
1,731,076 - 13460 mRNA_5092 0.47 1.4
1,731,109 + 13460 mRNA_5092 0.50 1.4
1,731,518 - 13460 mRNA_5092 0.78 0.2
1,731,520 - 13460 mRNA_5092 0.78 0.4
1,731,526 + 13460 mRNA_5092 0.79 0.3
1,731,677 - 13460 mRNA_5092 0.89 -1.1
1,731,694 + 0.1
1,731,831 - 0.8
1,731,845 - 0.2
1,731,848 + -0.4
1,731,851 + -1.0
1,731,853 - -0.1
1,731,862 + 1.4
1,731,938 - -0.4
1,731,979 - 0.7
1,731,986 + -1.0
1,731,987 + 0.9
1,731,987 + 0.3
1,731,990 - -0.6
1,731,997 - -0.5
1,732,016 - -0.1
1,732,017 + 0.2
1,732,120 - 0.1
1,732,125 + -0.1
1,732,129 - -0.2
1,732,142 + 1.4
1,732,149 - -0.2
1,732,149 + 0.2
1,732,152 + 1.8
1,732,161 - 0.2
1,732,271 - -0.7
1,732,274 - -0.4
1,732,293 + -0.8
1,732,580 + 13461 mRNA_5093 0.41 0.4
1,732,729 + 13461 mRNA_5093 0.62 -0.8