Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4869

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4868: 13236 - HMMPfam-DASH complex subunit Dad1-PF08649, at 1179404 to 1180039 13236 mRNA_4869: 13237 - K03364 CDH1 cell division cycle 20-like protein 1, cofactor of APC complex, at 1180583 to 1182754 13237 mRNA_4870: 13238 - KOG2533 Permease of the major facilitator superfamily, at 1183221 to 1185751 13238

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,179,849 + 13236 mRNA_4868 0.70 0.3
1,179,989 + 0.6
1,180,123 - 0.2
1,180,256 - -1.2
1,180,257 + 0.8
1,180,263 + -0.8
1,180,287 + 1.7
1,180,417 - -2.6
1,180,422 + -0.0
1,180,428 + 1.4
1,180,430 - 0.1
1,180,570 - -0.2
1,180,727 - 2.1
1,180,740 + 0.8
1,180,856 + 13237 mRNA_4869 0.13 1.1
1,181,112 + 13237 mRNA_4869 0.24 0.7
1,181,427 - 13237 mRNA_4869 0.39 1.5
1,181,590 + 13237 mRNA_4869 0.46 -0.6
1,181,642 - 13237 mRNA_4869 0.49 0.4
1,181,927 + 13237 mRNA_4869 0.62 1.9
1,182,005 - 13237 mRNA_4869 0.65 2.6
1,182,340 - 13237 mRNA_4869 0.81 -1.3
1,182,722 - 0.0