Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4783

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4782: 13150 - Hypothetical Protein, at 1002012 to 1003066 13150 mRNA_4783: 13151 - Hypothetical Protein, at 1003364 to 1007134 13151 mRNA_4784: 13152 - BLAST calmodulin-like protein [Mycena chlorophos], at 1008050 to 1008769 13152

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,002,599 - 13150 mRNA_4782 0.56 -2.5
1,002,987 + 0.3
1,003,129 - -0.3
1,003,173 + -0.3
1,003,267 - 1.2
1,003,297 - 0.3
1,003,362 + 0.4
1,003,402 - -0.5
1,003,556 + 0.7
1,003,691 - 1.0
1,003,869 + 13151 mRNA_4783 0.13 0.4
1,003,976 + 13151 mRNA_4783 0.16 0.2
1,003,976 + 13151 mRNA_4783 0.16 -0.7
1,003,996 + 13151 mRNA_4783 0.17 -0.2
1,004,121 + 13151 mRNA_4783 0.20 -0.2
1,004,162 + 13151 mRNA_4783 0.21 -0.2
1,004,299 - 13151 mRNA_4783 0.25 0.7
1,004,310 + 13151 mRNA_4783 0.25 0.7
1,004,349 + 13151 mRNA_4783 0.26 2.6
1,004,565 + 13151 mRNA_4783 0.32 0.5
1,004,740 - 13151 mRNA_4783 0.36 -0.9
1,004,845 - 13151 mRNA_4783 0.39 -0.7
1,004,852 - 13151 mRNA_4783 0.39 -0.3
1,004,857 - 13151 mRNA_4783 0.40 0.3
1,004,892 - 13151 mRNA_4783 0.41 0.2
1,004,897 - 13151 mRNA_4783 0.41 -1.1
1,004,901 + 13151 mRNA_4783 0.41 -0.6
1,004,902 + 13151 mRNA_4783 0.41 1.0
1,004,905 - 13151 mRNA_4783 0.41 1.4
1,004,905 - 13151 mRNA_4783 0.41 0.7
1,004,907 + 13151 mRNA_4783 0.41 1.1
1,004,914 - 13151 mRNA_4783 0.41 -0.0
1,004,930 - 13151 mRNA_4783 0.42 -1.1
1,004,930 - 13151 mRNA_4783 0.42 -0.7
1,004,930 - 13151 mRNA_4783 0.42 -1.7
1,004,950 + 13151 mRNA_4783 0.42 -0.1
1,004,972 + 13151 mRNA_4783 0.43 -0.3
1,004,989 + 13151 mRNA_4783 0.43 0.1
1,004,992 + 13151 mRNA_4783 0.43 0.2
1,004,992 - 13151 mRNA_4783 0.43 0.9
1,005,033 - 13151 mRNA_4783 0.44 -0.5
1,005,037 - 13151 mRNA_4783 0.44 0.3
1,005,038 + 13151 mRNA_4783 0.44 0.3
1,005,038 + 13151 mRNA_4783 0.44 1.6
1,005,039 - 13151 mRNA_4783 0.44 0.9
1,005,041 + 13151 mRNA_4783 0.44 -0.2
1,005,042 - 13151 mRNA_4783 0.44 1.9
1,005,044 - 13151 mRNA_4783 0.45 -0.7
1,005,046 + 13151 mRNA_4783 0.45 -0.4
1,005,048 + 13151 mRNA_4783 0.45 0.3
1,005,051 + 13151 mRNA_4783 0.45 0.8
1,005,056 - 13151 mRNA_4783 0.45 1.0
1,005,059 - 13151 mRNA_4783 0.45 1.7
1,005,063 - 13151 mRNA_4783 0.45 -0.4
1,005,063 + 13151 mRNA_4783 0.45 0.4
1,005,069 + 13151 mRNA_4783 0.45 1.0
1,005,070 + 13151 mRNA_4783 0.45 -0.3
1,005,079 + 13151 mRNA_4783 0.45 0.8
1,005,202 - 13151 mRNA_4783 0.49 -0.1
1,005,489 - 13151 mRNA_4783 0.56 0.8
1,005,801 - 13151 mRNA_4783 0.65 0.5
1,006,092 + 13151 mRNA_4783 0.72 -0.6
1,006,529 - 13151 mRNA_4783 0.84 0.0
1,006,659 + 13151 mRNA_4783 0.87 -0.7
1,006,774 + 1.2
1,006,812 + 0.4
1,006,834 + 3.2
1,006,837 + 1.7
1,006,901 - 0.9
1,006,910 - 0.5
1,006,915 + 1.2
1,006,922 - 0.5
1,006,929 + 0.2
1,006,946 + 0.2
1,006,956 - -0.5
1,006,959 - 0.8
1,006,971 - 2.9
1,006,980 - -1.2
1,006,981 - 1.8
1,006,990 - -0.0
1,006,991 - 1.0
1,006,991 + 0.6
1,007,000 + 1.1
1,007,006 + 0.2
1,007,008 + 0.1
1,007,008 + 1.4
1,007,023 + 0.2
1,007,066 - -0.6
1,007,073 - 0.5
1,007,076 - 0.5
1,007,082 + 0.3
1,007,097 - 0.9
1,007,110 + -0.8
1,007,211 + -0.4
1,007,261 - 0.2
1,007,400 + 0.0
1,007,414 - 0.5
1,007,430 + -0.0
1,007,483 - 1.9
1,007,664 - 0.9
1,007,677 + 0.2
1,007,684 - 0.6
1,007,700 - 1.3
1,007,716 - -0.2
1,007,732 - 1.2
1,007,845 + 2.3
1,008,134 - 13152 mRNA_4784 0.12 0.4