Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4681

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4681: 13049 - K01539 ATP1A sodium/potassium-transporting ATPase subunit alpha, at 759600 to 763345 13049 mRNA_4682: 13050 - HMMPfam-Tim44-like domain-PF04280,SMART--SM00978,SUPERFAMILY--SSF54427, at 764106 to 764879 13050

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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758,719 - -0.1
758,725 + -0.7
758,726 - -0.3
758,728 + 0.1
758,744 + 1.3
758,891 + -0.1
759,001 + 0.7
759,003 - -0.8
759,015 + 0.6
759,027 - 0.9
759,029 - -0.1
759,031 - -1.6
759,158 - 1.4
759,166 + 0.6
759,185 + 1.3
759,214 - 0.0
759,292 - 0.3
759,299 - 0.2
759,335 - 0.1
759,340 - -2.9
759,343 + 1.8
759,357 + 1.5
759,365 + -0.2
760,062 + 13049 mRNA_4681 0.12 0.4
760,215 + 13049 mRNA_4681 0.16 0.3
760,818 - 13049 mRNA_4681 0.33 0.3
761,219 - 13049 mRNA_4681 0.43 0.3
762,314 + 13049 mRNA_4681 0.72 -1.1
762,564 + 13049 mRNA_4681 0.79 -0.1
762,742 + 13049 mRNA_4681 0.84 1.4
762,754 + 13049 mRNA_4681 0.84 0.2
762,873 + 13049 mRNA_4681 0.87 -1.9
762,883 + 13049 mRNA_4681 0.88 2.3
762,887 + 13049 mRNA_4681 0.88 0.2
763,284 + 0.2
763,324 + 1.5
763,432 + 1.8
763,469 - 0.8
763,587 + 1.8
763,608 - -0.3
763,890 - -1.0
763,904 + -1.5