Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4561

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4560: 12928 - Hypothetical Protein, at 463085 to 464279 12928 mRNA_4561: 12929 - K06990 MEMO1 MEMO1 family protein, at 464488 to 466003 12929 mRNA_4562: 12930 - K11366 USP22_27_51, UBP8 ubiquitin carboxyl-terminal hydrolase 22/27/51, at 466499 to 468748 12930

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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463,888 + 12928 mRNA_4560 0.67 -0.3
464,053 - 12928 mRNA_4560 0.81 0.9
464,163 + 1.0
464,335 + 1.4
464,335 + 0.8
464,342 + 0.5
464,371 + 0.4
464,393 - 0.3
464,444 + 0.2
464,541 - -0.6
464,547 + 2.2
464,556 - -0.9
464,563 - -1.7
465,113 - 12929 mRNA_4561 0.41 -1.4
465,712 - 12929 mRNA_4561 0.81 2.0
465,742 + 12929 mRNA_4561 0.83 0.1
465,894 - 0.4
465,996 + 1.0
465,996 + 0.5
466,006 - -1.2
466,021 + 1.8
466,157 - -0.0
466,174 + -0.0
466,178 - 1.6
466,183 + 0.0
466,324 - 1.2
466,325 + 0.8
466,332 - 0.4
466,333 + -0.5
466,333 + -0.4
466,473 + -0.1
466,473 + -0.4
466,480 - 0.7
466,490 - 0.5
466,770 + 12930 mRNA_4562 0.12 -0.2
466,783 + 12930 mRNA_4562 0.13 0.1
466,928 + 12930 mRNA_4562 0.19 -2.3
466,930 - 12930 mRNA_4562 0.19 0.7
466,932 - 12930 mRNA_4562 0.19 -0.7