Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4490

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4489: 12857 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 302712 to 304024 12857 mRNA_4490: 12858 - KOG1208 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 304461 to 305865 12858 mRNA_4491: 12859 - Hypothetical Protein, at 306091 to 307232 12859

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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303,480 - 12857 mRNA_4489 0.58 -0.4
303,490 - 12857 mRNA_4489 0.59 -0.8
303,781 - 12857 mRNA_4489 0.81 0.7
303,796 + 12857 mRNA_4489 0.83 1.4
303,924 - 1.3
303,937 - 1.1
304,081 - -0.4
304,083 + 2.5
304,112 + -0.1
304,112 + -0.4
304,122 + 1.4
304,123 - -0.3
304,174 - 1.2
304,196 - -1.1
304,234 + 0.4
304,271 + -0.1
304,316 - 1.2
304,338 + 0.7
304,668 - 12858 mRNA_4490 0.15 1.4
304,947 + 12858 mRNA_4490 0.35 -0.5
305,112 + 12858 mRNA_4490 0.46 0.4
305,263 - 12858 mRNA_4490 0.57 0.4
305,325 - 12858 mRNA_4490 0.61 -1.0
305,721 + 12858 mRNA_4490 0.90 2.1
305,904 - 0.1
306,298 + 12859 mRNA_4491 0.18 -0.0
306,548 - 12859 mRNA_4491 0.40 0.8
306,586 + 12859 mRNA_4491 0.43 -1.1
306,765 + 12859 mRNA_4491 0.59 0.7
306,812 + 12859 mRNA_4491 0.63 1.4