Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4419

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4418: 12786 - KOG3683 Uncharacterized conserved protein, at 138075 to 139542 12786 mRNA_4419: 12787 - K11121 SIR2 NAD-dependent histone deacetylase SIR2, at 139865 to 142182 12787 mRNA_4420: 12788 - Hypothetical Protein, at 142782 to 144296 12788

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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139,579 - 1.3
139,611 + 0.5
139,626 + 0.6
139,751 + 1.4
139,756 + -1.4
139,795 + 0.5
139,896 - 0.6
139,897 - 1.5
139,935 - -2.1
140,060 - 0.4
140,102 + 12787 mRNA_4419 0.10 0.4
140,110 - 12787 mRNA_4419 0.11 0.9
140,355 + 12787 mRNA_4419 0.21 0.4
140,509 - 12787 mRNA_4419 0.28 0.0
142,307 + 0.8
142,356 - -1.2
142,405 - 0.3
142,412 + 1.9
142,487 + 0.8
142,562 + 1.8
142,622 + 0.5
142,628 - -0.9
142,727 - -1.8
143,182 + 12788 mRNA_4420 0.26 0.0
143,182 + 12788 mRNA_4420 0.26 1.4