Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4406

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4405: 12773 - K05925 METTL3_14 mRNA (2'-O-methyladenosine-N6-)-methyltransferase, at 105098 to 106781 12773 mRNA_4406: 12774 - KOG2100 Dipeptidyl aminopeptidase, at 106855 to 109155 12774 mRNA_4407: 12775 - HMMPfam-Acetyltransferase (GNAT) family-PF00583,ProSiteProfiles-Gcn5-related N-acetyltransferase (GNAT) domain profile.-PS51186,SUPERFAMILY--SSF55729, at 109306 to 110822 12775

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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106,274 - 12773 mRNA_4405 0.70 2.1
106,391 + 12773 mRNA_4405 0.77 1.5
106,440 + 12773 mRNA_4405 0.80 1.3
106,606 + 12773 mRNA_4405 0.90 1.6
106,843 - 0.8
107,151 + 12774 mRNA_4406 0.13 0.1
107,279 - 12774 mRNA_4406 0.18 -0.2
107,298 - 12774 mRNA_4406 0.19 0.1
107,298 + 12774 mRNA_4406 0.19 0.2
107,422 + 12774 mRNA_4406 0.25 1.3
107,487 - 12774 mRNA_4406 0.27 -0.7
107,531 + 12774 mRNA_4406 0.29 0.7
107,762 - 12774 mRNA_4406 0.39 0.8
108,202 - 12774 mRNA_4406 0.59 1.2
108,625 + 12774 mRNA_4406 0.77 1.0
108,710 - 12774 mRNA_4406 0.81 0.8
108,723 + 12774 mRNA_4406 0.81 -0.0
108,846 - 12774 mRNA_4406 0.87 1.6
108,915 + 12774 mRNA_4406 0.90 0.6
108,927 + 0.7
108,932 - 1.1
108,938 - 0.8
108,981 - 2.2
109,076 - -0.4
109,077 - 0.5
109,211 - 0.5
109,228 - 1.9
109,246 - 1.0
109,251 + 0.4
109,252 + -2.7
109,252 + -0.6
109,254 - -1.4
109,266 + 0.4
109,278 + -0.4
109,332 + 0.2
109,347 - 0.1
109,361 - 0.2
109,375 + 0.7
109,501 - 12775 mRNA_4407 0.13 0.1
109,553 - 12775 mRNA_4407 0.16 0.6
109,593 + 12775 mRNA_4407 0.19 -0.2
109,604 - 12775 mRNA_4407 0.20 -1.0
109,647 - 12775 mRNA_4407 0.22 0.0
109,779 - 12775 mRNA_4407 0.31 0.9
109,803 + 12775 mRNA_4407 0.33 -1.4
109,891 - 12775 mRNA_4407 0.39 1.5
110,055 - 12775 mRNA_4407 0.49 1.1
110,083 - 12775 mRNA_4407 0.51 0.4