Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4284

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4283: 12651 - KOG2383 Predicted ATPase, at 1797865 to 1800888 12651 mRNA_4284: 12652 - KOG2806 Chitinase, at 1801203 to 1803513 12652 mRNA_4285: 12653 - K18162 NDUFAF5 NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 5, at 1803577 to 1805345 12653

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,800,377 + 12651 mRNA_4283 0.83 0.8
1,800,527 + 12651 mRNA_4283 0.88 0.4
1,800,565 + 12651 mRNA_4283 0.89 0.7
1,800,583 - 12651 mRNA_4283 0.90 1.1
1,800,843 - 0.5
1,800,852 + 1.0
1,800,864 + 0.6
1,800,878 + -0.6
1,801,028 - -0.4
1,801,034 + 1.6
1,801,294 + 0.1
1,801,406 - 2.4
1,801,518 + 12652 mRNA_4284 0.14 1.1
1,801,895 + 12652 mRNA_4284 0.30 0.9
1,801,937 - 12652 mRNA_4284 0.32 0.4
1,802,001 - 12652 mRNA_4284 0.35 1.2
1,802,298 + 12652 mRNA_4284 0.47 0.6
1,802,491 - 12652 mRNA_4284 0.56 2.2
1,802,762 + 12652 mRNA_4284 0.67 0.3
1,803,218 - 12652 mRNA_4284 0.87 0.8
1,803,340 - 0.5
1,803,473 + 0.5
1,803,482 + 1.0
1,803,507 + 1.6