Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4273

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4272: 12640 - K02433 gatA, QRSL1 aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A, at 1765138 to 1767269 12640 mRNA_4273: 12641 - BLAST cellular morphogenesis-related protein [Monilioph..., at 1767656 to 1771232 12641 mRNA_4274: 12642 - K01720 prpD 2-methylcitrate dehydratase, at 1771477 to 1773946 12642

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,767,377 + 2.2
1,767,391 - 0.9
1,767,393 + -0.3
1,767,411 - -0.3
1,767,417 - 0.5
1,767,424 + -0.2
1,767,424 + -0.2
1,767,424 + -0.4
1,767,451 + 2.6
1,767,467 + 2.0
1,767,536 - 1.3
1,767,572 + 0.3
1,767,590 + -0.1
1,767,733 - 0.3
1,767,751 + 0.8
1,767,815 - 0.9
1,767,865 - 0.6
1,768,053 + 12641 mRNA_4273 0.11 -0.7
1,768,056 + 12641 mRNA_4273 0.11 2.3
1,768,061 - 12641 mRNA_4273 0.11 0.5
1,768,165 + 12641 mRNA_4273 0.14 0.1
1,768,174 + 12641 mRNA_4273 0.14 2.1
1,768,180 - 12641 mRNA_4273 0.15 0.8
1,768,195 - 12641 mRNA_4273 0.15 1.4
1,768,281 - 12641 mRNA_4273 0.17 -0.2
1,768,425 + 12641 mRNA_4273 0.21 0.6
1,768,543 - 12641 mRNA_4273 0.25 1.4
1,768,906 - 12641 mRNA_4273 0.35 2.6
1,769,048 - 12641 mRNA_4273 0.39 2.6
1,769,197 - 12641 mRNA_4273 0.43 0.7
1,769,343 - 12641 mRNA_4273 0.47 1.9
1,769,982 + 12641 mRNA_4273 0.65 0.8
1,770,043 - 12641 mRNA_4273 0.67 1.7
1,770,048 + 12641 mRNA_4273 0.67 -0.4
1,770,485 - 12641 mRNA_4273 0.79 0.4
1,770,485 + 12641 mRNA_4273 0.79 -1.3
1,770,678 - 12641 mRNA_4273 0.84 0.7
1,770,681 - 12641 mRNA_4273 0.85 -0.0
1,770,686 + 12641 mRNA_4273 0.85 -0.2
1,770,942 - 1.9
1,771,054 - 0.4
1,771,093 + 2.1
1,771,093 + 0.3
1,771,108 - 0.5
1,771,117 - 0.1
1,771,210 - 0.5
1,771,232 - 0.1
1,771,234 + -0.2
1,771,242 - 0.7
1,771,245 + 0.3
1,771,259 + 1.5
1,771,382 + -0.9
1,771,404 - 0.3
1,771,413 - 0.2
1,771,427 + 0.8
1,771,449 + 0.1
1,771,557 - 0.4
1,771,578 - -1.1
1,771,699 - 0.9
1,771,702 + 1.6
1,771,706 + -1.0
1,771,715 + 0.2
1,771,880 + 12642 mRNA_4274 0.16 0.8
1,772,023 - 12642 mRNA_4274 0.22 1.2