Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4192

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4191: 12559 - HMMPfam-GAF domain-PF13492,SMART-Domain present in phytochromes and cGMP-specific phosphodiesterases.-SM00065,SUPERFAMILY--SSF55781, at 1577010 to 1579239 12559 mRNA_4192: 12560 - K04797 pfdA, PFDN5 prefoldin alpha subunit, at 1579448 to 1580118 12560 mRNA_4193: 12561 - Hypothetical Protein, at 1580428 to 1584449 12561

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1,578,524 - 12559 mRNA_4191 0.68 -0.9
1,578,529 - 12559 mRNA_4191 0.68 0.5
1,578,533 + 12559 mRNA_4191 0.68 0.9
1,578,971 + 12559 mRNA_4191 0.88 0.5
1,579,205 - -0.3
1,579,228 - 0.1
1,579,233 + 0.0
1,579,248 - 0.1
1,579,381 - 1.1
1,579,407 + 0.6
1,579,502 - 0.7
1,579,543 + 12560 mRNA_4192 0.14 -0.6
1,579,681 - 12560 mRNA_4192 0.35 -0.8
1,580,278 + -0.0
1,580,387 + -0.2
1,580,393 - 0.8
1,580,395 - -0.9
1,580,396 + -0.5
1,580,748 + 0.5
1,580,870 + 12561 mRNA_4193 0.11 1.0
1,580,871 + 12561 mRNA_4193 0.11 0.5