Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3686

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3685: 12053 - KOG4212 RNA-binding protein hnRNP-M, at 345213 to 348082 12053 mRNA_3686: 12054 - SUPERFAMILY--SSF54695, at 348229 to 349499 12054 mRNA_3687: 12055 - K14837 NOP12 nucleolar protein 12, at 349923 to 352122 12055

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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347,911 + 2.8
347,957 - -0.6
348,079 + 1.1
348,230 + 1.0
348,371 - 12054 mRNA_3686 0.11 0.1
348,395 - 12054 mRNA_3686 0.13 0.4
348,814 - 12054 mRNA_3686 0.46 0.0
348,832 + 12054 mRNA_3686 0.47 0.7
349,123 + 12054 mRNA_3686 0.70 0.4
349,149 - 12054 mRNA_3686 0.72 -0.2
349,237 + 12054 mRNA_3686 0.79 0.1
349,384 + 1.3
349,400 - 1.7
349,412 - 1.2
349,412 - 0.4
349,415 - 1.0
349,417 + 0.4
349,417 + -0.7
349,417 + -0.2
349,430 - 0.2
349,539 + 0.9
349,556 - 0.4
349,562 + 1.1
349,567 - -0.4
349,569 - -0.1
349,580 + 0.0
349,590 + 1.3
349,604 + 0.3
349,605 - 0.1
349,634 + 1.1
349,656 - -0.4
349,751 + 0.6
349,867 + -0.5
349,883 + 0.4
349,889 + 0.2