Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3537

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3537: 11905 - Hypothetical Protein, at 102 to 917 11905

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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2 + -1.1
2 + 1.4
2 + -0.1
2 + 0.2
2 + -0.1
2 + 0.1
2 + 0.2
14 + 0.3
26 + -0.0
36 + 2.2
39 + -0.2
42 - -0.2
50 + 1.4
50 + -1.7
50 + -0.2
53 - -0.4
57 + 1.9
59 - 2.3
103 + 0.4
104 + -0.3
112 + 0.7
117 - 0.5
120 - -2.2
140 - -0.8
141 + -0.9
146 + -0.1
150 + -1.1
199 - 11905 mRNA_3537 0.12 0.5
200 + 11905 mRNA_3537 0.12 -0.7
200 - 11905 mRNA_3537 0.12 0.7
200 - 11905 mRNA_3537 0.12 -1.6
200 - 11905 mRNA_3537 0.12 -0.3
201 - 11905 mRNA_3537 0.12 -0.3
207 + 11905 mRNA_3537 0.13 0.7
207 + 11905 mRNA_3537 0.13 -1.3
207 + 11905 mRNA_3537 0.13 -0.5
209 + 11905 mRNA_3537 0.13 0.7
210 + 11905 mRNA_3537 0.13 -0.7
213 + 11905 mRNA_3537 0.14 -0.0
213 + 11905 mRNA_3537 0.14 1.5
214 + 11905 mRNA_3537 0.14 -1.8
214 + 11905 mRNA_3537 0.14 -0.2
218 + 11905 mRNA_3537 0.14 1.8
221 + 11905 mRNA_3537 0.15 -0.6
222 + 11905 mRNA_3537 0.15 -0.0
222 + 11905 mRNA_3537 0.15 0.3
222 + 11905 mRNA_3537 0.15 -1.0
223 - 11905 mRNA_3537 0.15 -0.7
225 - 11905 mRNA_3537 0.15 -2.2
227 - 11905 mRNA_3537 0.15 1.2
227 + 11905 mRNA_3537 0.15 -0.0
230 + 11905 mRNA_3537 0.16 2.9
230 + 11905 mRNA_3537 0.16 0.8
246 - 11905 mRNA_3537 0.18 0.4
246 - 11905 mRNA_3537 0.18 -1.2
251 + 11905 mRNA_3537 0.18 -0.1
252 + 11905 mRNA_3537 0.18 0.9
260 + 11905 mRNA_3537 0.19 -0.4
262 + 11905 mRNA_3537 0.20 -1.0
265 - 11905 mRNA_3537 0.20 1.4
272 - 11905 mRNA_3537 0.21 -0.0
274 + 11905 mRNA_3537 0.21 -0.2
325 - 11905 mRNA_3537 0.27 -0.2
326 - 11905 mRNA_3537 0.27 -0.3
341 + 11905 mRNA_3537 0.29 -0.4
359 + 11905 mRNA_3537 0.31 -0.5
362 + 11905 mRNA_3537 0.32 1.0
367 - 11905 mRNA_3537 0.32 0.3
368 + 11905 mRNA_3537 0.33 -0.3
368 + 11905 mRNA_3537 0.33 -0.2
368 + 11905 mRNA_3537 0.33 -1.8
373 + 11905 mRNA_3537 0.33 0.3
373 - 11905 mRNA_3537 0.33 -0.5
373 - 11905 mRNA_3537 0.33 0.2
379 + 11905 mRNA_3537 0.34 -0.5
380 + 11905 mRNA_3537 0.34 0.8
417 + 11905 mRNA_3537 0.39 1.5
452 + 11905 mRNA_3537 0.43 -0.6
472 + 11905 mRNA_3537 0.45 -1.2
484 + 11905 mRNA_3537 0.47 -0.6
489 - 11905 mRNA_3537 0.47 -1.2
503 - 11905 mRNA_3537 0.49 -0.2
511 + 11905 mRNA_3537 0.50 1.1
518 + 11905 mRNA_3537 0.51 -0.6
523 + 11905 mRNA_3537 0.52 0.9
533 + 11905 mRNA_3537 0.53 0.2
539 + 11905 mRNA_3537 0.54 -0.4
550 + 11905 mRNA_3537 0.55 0.5
579 + 11905 mRNA_3537 0.58 0.5
638 - 11905 mRNA_3537 0.66 -1.1
640 - 11905 mRNA_3537 0.66 1.7
657 + 11905 mRNA_3537 0.68 0.7
762 - 11905 mRNA_3537 0.81 -0.5
768 + 11905 mRNA_3537 0.82 0.7
791 - 11905 mRNA_3537 0.84 -0.1
801 + 11905 mRNA_3537 0.86 0.1
804 + 11905 mRNA_3537 0.86 0.1
822 + 11905 mRNA_3537 0.88 1.3
827 + 11905 mRNA_3537 0.89 -0.1
842 + 0.8
842 + 2.1
845 - 0.7
962 - 0.4
990 + 1.5
1,074 + -2.0
1,080 - -0.4
1,107 + 0.1
1,110 - 0.2
1,123 + 1.9
1,143 + 0.1
1,256 - 0.4
1,278 + -1.5
1,336 + -0.0
1,371 - 0.2
1,404 - 0.5
1,429 + -0.5
1,450 + -0.5
1,528 + -0.1
1,550 + 0.3
1,647 - -0.1
1,653 + 0.9
1,661 - 1.8
1,663 + 0.8
1,719 + 0.1
1,720 + 0.9
1,760 + 1.1
1,814 - -0.2
1,902 - 1.4