Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3534

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3533: 11901 - K08337 ATG7 ubiquitin-like modifier-activating enzyme ATG7, at 327096 to 329991 11901 mRNA_3534: 11902 - Hypothetical Protein, at 330976 to 331488 11902 mRNA_3535: 11903 - HMMPfam-Protein of unknown function (DUF2419)-PF10343, at 331726 to 332711 11903

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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330,208 + 0.2
330,213 + 0.7
330,232 + -0.1
330,242 - 0.5
330,343 + -0.8
330,361 - -0.5
330,485 - 0.5
330,509 + 1.7
330,653 + 0.2
331,078 + 11902 mRNA_3534 0.20 0.7
331,081 - 11902 mRNA_3534 0.20 -1.5
331,234 - 11902 mRNA_3534 0.50 0.5
331,236 + 11902 mRNA_3534 0.51 1.6
331,379 + 11902 mRNA_3534 0.79 1.0
331,487 - 0.8
331,509 - 0.5
331,514 + 0.4
331,520 - 0.0
331,538 + 0.7
331,651 - 0.5
332,134 - 11903 mRNA_3535 0.41 0.0