Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3071

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3071: 11439 - Hypothetical Protein, at 245578 to 247225 11439 mRNA_3072: 11440 - KOG1203 Predicted dehydrogenase, at 248202 to 249247 11440

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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244,721 - 0.4
244,732 - -0.8
244,839 - 0.5
244,865 + 0.0
244,987 + 0.5
245,018 + 0.3
245,171 - 0.5
245,277 - 0.4
245,292 + -0.6
245,331 - 1.1
245,460 + -0.4
245,873 + 11439 mRNA_3071 0.18 0.1
246,163 + 11439 mRNA_3071 0.35 0.2
246,296 - 11439 mRNA_3071 0.44 2.0
246,359 - 11439 mRNA_3071 0.47 0.4
246,440 - 11439 mRNA_3071 0.52 -2.1
246,462 - 11439 mRNA_3071 0.54 1.7
246,473 + 11439 mRNA_3071 0.54 1.4
246,568 + 11439 mRNA_3071 0.60 -0.6
246,578 - 11439 mRNA_3071 0.61 1.3
246,579 - 11439 mRNA_3071 0.61 0.6
246,584 + 11439 mRNA_3071 0.61 -0.8
246,584 + 11439 mRNA_3071 0.61 -0.8
246,584 + 11439 mRNA_3071 0.61 1.3
246,584 + 11439 mRNA_3071 0.61 0.0
246,584 + 11439 mRNA_3071 0.61 0.2
246,584 + 11439 mRNA_3071 0.61 0.5
246,584 + 11439 mRNA_3071 0.61 0.4
246,620 + 11439 mRNA_3071 0.63 0.3
246,657 + 11439 mRNA_3071 0.65 0.2
246,696 - 11439 mRNA_3071 0.68 -0.4
246,753 - 11439 mRNA_3071 0.71 0.5
246,753 + 11439 mRNA_3071 0.71 1.0
246,828 + 11439 mRNA_3071 0.76 1.4
246,865 + 11439 mRNA_3071 0.78 1.6
246,934 - 11439 mRNA_3071 0.82 -1.4
247,161 + 0.5
247,284 + 0.7
247,294 - 0.4
247,297 + -0.4
247,311 - 0.2
247,313 - 1.2
247,314 + 0.2
247,444 - 1.4
247,467 - 0.8
247,589 - 1.0
247,597 - 1.2
247,599 + 1.0
247,603 - 1.7
247,605 + 1.7
247,615 + 1.3
247,617 - 0.6
247,618 - 1.5
247,620 + -3.1
247,623 + 1.8
247,625 - -2.4
247,745 + -0.2
247,757 + 0.3
247,765 - -1.1
247,771 + 0.5
247,868 + -0.6
247,908 - 1.0
247,917 - -1.3
247,922 + -0.6
248,052 - 1.1
248,054 - 0.4
248,064 + 0.2
248,077 - 0.7