Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_3030

Experiments: YNB Glucose

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_3029: 11397 - K14688 SLC30A1, ZNT1 solute carrier family 30 (zinc transporter), member 1, at 134923 to 137066 11397 mRNA_3030: 11398 - Hypothetical Protein, at 137392 to 137958 11398 mRNA_3031: 11399 - KOG0527 HMG-box transcription factor, at 138430 to 140039 11399

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
remove
136,530 - 11397 mRNA_3029 0.75 0.1
136,541 + 11397 mRNA_3029 0.75 0.5
136,674 + 11397 mRNA_3029 0.82 0.7
136,697 + 11397 mRNA_3029 0.83 0.6
136,822 + 11397 mRNA_3029 0.89 -1.6
136,965 - -0.4
136,983 - -0.5
137,111 + 0.0
137,122 + -0.7
137,123 + 0.7
137,123 - -0.2
137,135 - -1.1
137,142 + 0.0
137,146 + 1.0
137,147 + 0.8
137,279 - -0.8
137,298 - 2.0
137,304 + 0.9
137,325 - 0.6
137,420 - 0.7
137,429 + 0.4
137,467 - 11398 mRNA_3030 0.13 -0.6
137,521 - 11398 mRNA_3030 0.23 0.6
137,566 - 11398 mRNA_3030 0.31 -0.8
137,864 - 11398 mRNA_3030 0.83 0.9
137,872 - 11398 mRNA_3030 0.85 0.3
137,882 - 11398 mRNA_3030 0.86 -0.3
137,918 + 0.2
138,012 - 0.7