Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2980

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2980: 11348 - KOG3140 Predicted membrane protein, at 23 to 1444 11348

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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1 + 1.4
1 + -0.1
1 + -1.4
21 + 0.9
21 + 0.2
21 + -1.0
41 + 0.8
42 + -0.2
44 + 3.1
79 - -0.5
79 + 1.9
149 - 1.8
264 + 11348 mRNA_2980 0.17 1.9
266 - 11348 mRNA_2980 0.17 0.6
338 - 11348 mRNA_2980 0.22 0.3
341 + 11348 mRNA_2980 0.22 0.7
454 - 11348 mRNA_2980 0.30 3.4
484 - 11348 mRNA_2980 0.32 -0.3
489 - 11348 mRNA_2980 0.33 0.9
491 + 11348 mRNA_2980 0.33 1.1
507 + 11348 mRNA_2980 0.34 1.7
510 + 11348 mRNA_2980 0.34 0.5
516 - 11348 mRNA_2980 0.35 0.1
654 + 11348 mRNA_2980 0.44 -0.3
719 + 11348 mRNA_2980 0.49 1.0
1,007 + 11348 mRNA_2980 0.69 0.8
1,048 - 11348 mRNA_2980 0.72 1.0
1,218 - 11348 mRNA_2980 0.84 -0.0
1,248 + 11348 mRNA_2980 0.86 0.5
1,364 + 1.1
1,374 - -1.0
1,401 + 2.1
1,452 + -0.0
1,488 - 0.4
1,503 + 0.0
1,513 + 1.0
1,515 - -0.2
1,551 + -2.0
1,634 + 0.3
1,635 + 0.7
1,657 + -0.6
1,668 + 0.4
1,805 - 1.1
1,805 + 0.4
1,818 + 0.2
1,882 + -0.1
1,934 + 0.3
1,948 + -0.5
1,949 - 0.4
1,974 + -0.4
1,992 + -0.6
1,992 + 2.1
1,993 + 1.4
2,011 + 1.1
2,082 + 0.4
2,084 - -0.1
2,086 + 1.0
2,086 + -0.3
2,086 + -0.4
2,095 + 0.6
2,097 - 2.7
2,098 + 0.5
2,115 + -0.3
2,117 + 1.6
2,120 + 0.8
2,121 - 0.5
2,121 - -0.1
2,125 - 1.2
2,126 + 0.8
2,131 + -0.5
2,131 + 0.1
2,131 + 2.4
2,133 + 0.2
2,243 + 1.2
2,265 + 1.5
2,301 + 0.0
2,320 + 1.2
2,324 - -0.2
2,357 + -0.1