Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2978

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2977: 11345 - K05758 ARPC2 actin related protein 2/3 complex, subunit 2, at 697458 to 698969 11345 mRNA_2978: 11346 - HMMPfam-Nucleotide-diphospho-sugar transferase-PF03407, at 699095 to 700907 11346 mRNA_2979: 11347 - Hypothetical Protein, at 700904 to 702212 11347

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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699,011 + 0.2
699,167 + 0.3
699,187 + 0.7
699,300 - 11346 mRNA_2978 0.11 2.0
699,305 - 11346 mRNA_2978 0.12 -0.1
699,305 - 11346 mRNA_2978 0.12 1.0
699,342 - 11346 mRNA_2978 0.14 2.2
699,375 + 11346 mRNA_2978 0.15 0.4
699,460 - 11346 mRNA_2978 0.20 1.1
699,478 - 11346 mRNA_2978 0.21 0.8
699,481 - 11346 mRNA_2978 0.21 0.7
699,487 + 11346 mRNA_2978 0.22 -0.6
699,617 - 11346 mRNA_2978 0.29 0.4
699,804 - 11346 mRNA_2978 0.39 1.1
699,822 - 11346 mRNA_2978 0.40 -1.7
700,062 + 11346 mRNA_2978 0.53 0.7
700,083 + 11346 mRNA_2978 0.54 0.5
700,299 + 11346 mRNA_2978 0.66 -0.1
700,398 + 11346 mRNA_2978 0.72 -1.2
700,469 - 11346 mRNA_2978 0.76 1.3
700,470 - 11346 mRNA_2978 0.76 1.2
700,470 - 11346 mRNA_2978 0.76 0.1
700,478 - 11346 mRNA_2978 0.76 -0.9
700,581 - 11346 mRNA_2978 0.82 -0.4
700,607 - 11346 mRNA_2978 0.83 0.4
700,611 + 11346 mRNA_2978 0.84 -0.7
700,611 + 11346 mRNA_2978 0.84 -0.3
700,619 - 11346 mRNA_2978 0.84 -0.4
700,800 - -0.6
700,827 + -0.5
700,907 + 0.6
700,908 + 1.5
700,922 + 0.4
700,924 - 1.7
701,072 - 11347 mRNA_2979 0.13 0.4
701,222 + 11347 mRNA_2979 0.24 1.7
701,276 - 11347 mRNA_2979 0.28 0.5
701,406 + 11347 mRNA_2979 0.38 1.3
701,457 - 11347 mRNA_2979 0.42 0.4
701,468 - 11347 mRNA_2979 0.43 1.0
701,468 - 11347 mRNA_2979 0.43 2.0
701,471 - 11347 mRNA_2979 0.43 0.3
701,503 - 11347 mRNA_2979 0.46 0.7
701,511 - 11347 mRNA_2979 0.46 0.3
701,517 + 11347 mRNA_2979 0.47 -0.2
701,517 - 11347 mRNA_2979 0.47 1.5
701,597 - 11347 mRNA_2979 0.53 0.3
701,602 - 11347 mRNA_2979 0.53 0.2
701,617 + 11347 mRNA_2979 0.54 1.4
701,656 - 11347 mRNA_2979 0.57 0.7
701,665 - 11347 mRNA_2979 0.58 1.9
701,668 - 11347 mRNA_2979 0.58 -0.9
701,697 - 11347 mRNA_2979 0.61 0.5
701,738 - 11347 mRNA_2979 0.64 0.9
701,765 - 11347 mRNA_2979 0.66 -0.1
701,822 - 11347 mRNA_2979 0.70 0.4
701,823 - 11347 mRNA_2979 0.70 0.3
701,871 - 11347 mRNA_2979 0.74 0.4
701,892 + 11347 mRNA_2979 0.75 -1.0
701,906 - 11347 mRNA_2979 0.77 1.8