Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2964

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2964: 11332 - K00965 galT, GALT UDPglucose--hexose-1-phosphate uridylyltransferase, at 664147 to 666205 11332 mRNA_2965: 11333 - KOG1721 FOG Zn-finger, at 666702 to 669525 11333

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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663,186 - 0.9
663,190 - -0.3
663,193 + -0.2
663,196 - -1.0
663,205 + 3.5
663,209 + 0.2
663,219 + 0.3
663,220 - 0.5
663,221 - 0.1
663,226 + 1.0
663,228 - 0.5
663,230 - 0.3
663,233 - 1.7
663,233 + 0.6
663,236 + 0.2
663,240 + 2.6
663,243 + 1.2
663,249 + 0.1
663,368 + 0.3
663,405 - -0.1
663,425 + 0.8
663,436 - -1.0
663,499 + -0.1
663,508 - 0.2
663,680 - 0.7
663,692 + 0.0
663,848 + 0.4
663,974 + 1.2
664,076 - 0.7
664,101 - -0.9
664,119 + 0.5
664,209 - 1.2
664,241 - 2.0
664,256 + 3.4
664,258 + -0.3
664,273 + -1.3
664,359 + 11332 mRNA_2964 0.10 -0.7
664,538 + 11332 mRNA_2964 0.19 0.6
664,686 - 11332 mRNA_2964 0.26 2.2
664,690 + 11332 mRNA_2964 0.26 0.7
664,853 + 11332 mRNA_2964 0.34 -1.3
664,972 - 11332 mRNA_2964 0.40 0.4
665,018 + 11332 mRNA_2964 0.42 0.1
665,274 + 11332 mRNA_2964 0.55 -0.2
665,284 + 11332 mRNA_2964 0.55 0.9
665,285 - 11332 mRNA_2964 0.55 -0.1
665,399 - 11332 mRNA_2964 0.61 0.1
665,563 + 11332 mRNA_2964 0.69 0.5
665,693 - 11332 mRNA_2964 0.75 2.0
665,842 + 11332 mRNA_2964 0.82 -0.9
666,254 - -0.7
666,271 + -0.9
666,423 + -0.0
666,551 - 1.5
666,612 - -0.4
666,632 + 0.1
666,634 - 0.2
666,673 + -0.1
666,702 + 0.3
666,930 + -0.7
667,019 + 11333 mRNA_2965 0.11 0.6