Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2886

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2885: 11253 - K20246 EGT1 L-histidine Nalpha-methyltransferase / hercynylcysteine S-oxide synthase, at 452122 to 455835 11253 mRNA_2886: 11254 - Hypothetical Protein, at 456184 to 458722 11254 mRNA_2887: 11255 - K07442 TRM61, GCD14 tRNA (adenine57-N1/adenine58-N1)-methyltransferase catalytic subunit, at 458953 to 460669 11255

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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455,619 + 1.2
455,622 + -1.5
455,749 - 1.9
455,749 - 0.3
455,766 + 2.2
455,883 - 1.0
455,891 - 0.3
455,900 + 0.8
455,905 - 0.5
455,906 + 0.5
455,911 + 0.1
455,924 + -1.1
455,935 + -0.5
455,943 - -0.0
455,945 - 0.3
455,946 + 0.6
456,078 - 0.6
456,096 - 1.1
456,118 - 1.0
456,118 - 0.2
456,150 + 0.4
456,191 - 0.2
456,267 + 1.2
456,287 - 0.1
456,626 - 11254 mRNA_2886 0.17 -0.5
457,154 + 11254 mRNA_2886 0.38 -1.2
457,466 + 11254 mRNA_2886 0.50 -0.1
457,593 + 11254 mRNA_2886 0.55 0.8
457,646 - 11254 mRNA_2886 0.58 0.2
457,973 + 11254 mRNA_2886 0.70 0.9
458,260 + 11254 mRNA_2886 0.82 0.4
458,423 + 11254 mRNA_2886 0.88 1.3
458,528 - 0.7
458,563 + 0.5
458,698 + 0.1
458,729 - 0.2
458,845 + 0.1
458,851 + -1.7
458,859 + 0.3
458,868 + 0.6
458,902 + 1.2
458,944 + 0.9
458,950 - -1.1