Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_2825

Experiments: YNB Glucose

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_2825: 11193 - HMMPfam-F-box-like-PF12937, at 306880 to 308238 11193 mRNA_2826: 11194 - HMMPfam-Methyltransferase domain-PF13489,SUPERFAMILY--SSF53335, at 308472 to 309591 11194

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Per-strain Table

Position Strand Gene Sysname Fraction YNB Glucose
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306,149 + 0.8
306,422 - 0.9
306,435 + -0.5
306,453 - -0.6
306,459 - 0.6
306,464 + -1.5
306,472 + -0.2
306,602 - 1.7
306,616 - 0.2
306,617 - -0.7
306,620 + 0.1
306,633 - 1.2
306,678 + 1.5
306,683 + 3.1
306,686 - 1.2
306,726 - 0.5
306,750 + 1.2
306,912 + 0.3
306,981 - 1.2
307,039 - 11193 mRNA_2825 0.12 0.3
307,057 - 11193 mRNA_2825 0.13 0.2
307,061 - 11193 mRNA_2825 0.13 0.6
307,126 - 11193 mRNA_2825 0.18 0.6
307,469 + 11193 mRNA_2825 0.43 0.1
307,908 - 11193 mRNA_2825 0.76 0.5
307,921 - 11193 mRNA_2825 0.77 0.2
307,924 - 11193 mRNA_2825 0.77 0.7
307,927 - 11193 mRNA_2825 0.77 0.3
307,950 + 11193 mRNA_2825 0.79 0.9
308,070 - 11193 mRNA_2825 0.88 0.5
308,071 + 11193 mRNA_2825 0.88 0.4
308,083 + 11193 mRNA_2825 0.89 1.4
308,088 - 11193 mRNA_2825 0.89 1.7
308,091 - 11193 mRNA_2825 0.89 1.7
308,091 + 11193 mRNA_2825 0.89 0.6
308,198 - -0.4
308,198 - 1.4
308,203 - -0.0
308,209 + 1.8
308,209 + 1.2
308,212 - 0.5
308,213 + -0.5
308,216 + 0.5
308,232 + -0.3
308,245 - 1.8
308,261 - 1.0
308,262 + 0.5
308,359 + 0.2
308,372 + 0.2
308,388 + 0.7
308,395 + 0.8
308,401 + 2.2
308,417 - 0.3
308,418 - -0.5
308,418 + -0.8
308,424 - -0.2
308,431 - -0.7
308,535 + 0.9
308,557 - 0.3
308,569 + 1.9
308,579 + 0.1
308,582 - 0.0
308,583 - 0.2
308,586 - 11194 mRNA_2826 0.10 0.2
308,589 - 11194 mRNA_2826 0.10 0.6
308,708 + 11194 mRNA_2826 0.21 -0.3
308,725 - 11194 mRNA_2826 0.23 0.9
308,870 + 11194 mRNA_2826 0.36 -0.8
308,997 + 11194 mRNA_2826 0.47 0.3
309,058 + 11194 mRNA_2826 0.52 0.6
309,177 - 11194 mRNA_2826 0.63 2.0